Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2480 |
Symbol | |
ID | 4483728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 3159046 |
End bp | 3161745 |
Gene Length | 2700 bp |
Protein Length | 899 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639723228 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_866386 |
Protein GI | 117925769 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.618287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.57938 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACAACG ACCCTCTAGA GAGCCTGGCC CAACGCATCG CACATATGCA TGGGGCGCTG GAGGCCAGCC AGAAGATACA GAATGCCTTG GTGGAACGCG CCGAACGCCA AGGGGGGGAG ACCCCCTTTA CCCTGTTTGA GCGGCATGCT TTGCTGGATC AACAGCTACG CCGTTCGCGG CAAGCGCTAC GCCATGCGAG GCGCGCCCTA GAGCATGAAC GCAGCCACCA CCAACAAACC CTCCGCCAGC AGCGGGTGGA GAGCTTGCGC CATCACACCA TTGTGGAGCA TGCCAGCGAC GCCATTTTAC AGGTCAATGG CGAGGGAGAC ATCCTCTACA GCAATCCAGC GGCACACAAG CTGTTTGGCT ATGACGAAGC GGCCTTGGCG AAAACGCCCC TGAGCACTCT GTTTCCAAAC CAACACCAGA GCCGCAGCCA ATCGGTCACG CTCTCTCTGC GACAAGATGC TGGACACGAC CACGCCCTAG CCTGGACCGC TCTGCGCAAC GATGGCGGTT TAATAGACGT AGGGGCCTTT ATCAGCCCGG TAGAAGCGGA AGATCAGGCG CTTTACACCC TTATTTTGCA CGATCTTTCC CTCCAATTAC GGCTGCATCA AGCCCAGGAA GAGAGCCGTG ATCAAGCCCT TACCAGCGAC CGCATCTGGA CCCAACTGCT CGACCGCATG ACGGAACAGT TGCGCACCCC CCTGCACAAT CTCGCGGGTC TGTTGGAGTT GCTGCAAAGC AACCCGCAAA AGGCGGCCCA ACAGGGTTAT TTGGAGAGTG CCCGCACCAC CGTCTCGGAG CTGCTGCAAC AACTGCAAAT GCTGCCCAAC CACACAACCT TGCTTAGTGC GCCGCTGGCG GGTGAACGTT TGACCTTTGA TCTCCTGCAA ATGTTAGAAG GCACCACCCG CCAGTGGGCC AGCGTTGCCC AACAAAAGGG GCTGCAACTG CTCTGTATGG TACCGCCGCA ACTGCCTGCG ATCTGGGAGG GTGACTTAAC CCGCCTGCGG CAGGTGGTGG GGGGATTGTT GGAACGTAGC GTGGGTGCCA CCCAGCAGGG CACGGTTTGC CTCTCCCTAC ACGCCCAGCA ACAGCCTAAT TCCAGTTGGT ATGAGCTTGA GATCTGCATT GCCGACAGTC GCCCCCCGAT GCAGACCGAG CAGATGATTG CTCTCCAGCA ATTTTTGCGG CAAGAGGGGC AGGCAGGCCC CTTGCATGAT GGGGCAGAAA CCCTGTCGCT GGCGATTATC CGTCAATTGG CGGGGTTTAT GCGGGGTCGT TTAGAGTTTG CCTTTGACCA TGAGCGGGGG GAGAGCCGTT TTATCCTCAG CTTACCGCTA CTGCCGGGCC CACAACCTAG CCAGCCGTTA ACCAGGGAGC TACTGGGCCG ACGAATTTTA ATTTTAGAGC CCTATCCAGC CTACGCGAAC TATCTCGCCA CCCTCTGCCA GCAGTGGGGC ATGGTTGCCC ACAGCACCAG CAGCGAGGCG CAAGCCATCG CAACATGGCA GGGGTTGCAG CAGTTGGGCA TGCTGCCGGA GTTTATGTTA GCCCCACCGG CAAACCCCGA CCAGCCCGCA CCTTGGCGCG ACGCCCCAGC GGGAACCCTG CATCTGTTAA CCCTAACCCG TGGGCCGACC CCAAACCAGC CTGCTAGCCT GTGCAAACCG CTCTCCCGCC AAGCTTTGTA CGAAGCCCTT ACCCAACAGC GACAGGATGC CCCCGCTGCA TCCCCTGCTT TACCTTCGCA CATCACCAAC CCACTACGCC AAGATCGCCT TTTATTGGTT GAGGATAACC CCATCAACCA AAAGGTCGCC TTAGGCATGC TCAAGCGGTT TGGTTTTCAA GCCACCGTCG TGGACCGTGG GGCCAAGGCG TTGCAAGCGG TCAAAGAGCA CCCCTTTGAT CTGATATTAA TGGATATTCA AATGCCAGAG ATGGATGGTT ATGCCACCAC TGCGGCGATC CGCCACTGGG AGCGCGAGAG CGGCACCCCG CGCCAGCCTA TCTCGGCCCT AACGGCCAAC GCCATGAGCG GCGACCGGGA GCTCTGTTTG GCCGCCGACA TGGATGACTA TCTCAGCAAG CCCCTTAAAC AGGAGGCTCT GTGGGATTTG CTCAAGCGCT GGTTAAACGA TCTGCCTGAG CACCCCCCCA TGCTGGAGCG ATCACCCCTT GCTGAGCCAG CCACCTTAGC CCCGCCTCTA CCCGCTGCCA AACCAGCAGA AAAACCTGTG GAAGCAGAGC CTGCCTCCAA CCCAACGACC CGTTGCCTAG ACCATGGTAA ATTAGATGAG CTTGAACGTA TGATGTCGGT TATGGAGAAT GGCTTTCAAG AGTTGCTTAG CCGTTATCTC AGCGACACTC CAGTTTTGTT GCAAAATTTG GCCGCCGCTG TCGAGGCACA GGATGCCAAG CAGGCCCGCC AACTGGCCCA CAATCTTAAA TCCACCAGCG CCAGTCTGGG GGCCAAGCTA CTTTCGGTGC AAGCTCAGCA GATAGAAGCG TTGAGCAAAC AGGGGCAAAC TGCGTTAATT CCACCCCTAC TGCCCGATCT GCTCCACCAT TTTCAACAGG CCGCGCGGGA GATGGCACAA CGCTTATCCC TTACGTCGAG CGGTTCAGGG GATGTGCCCC AGTCGCAAAA AGCGTGCGTT TCAGCCAATT TTAACACCGC TCTGGGTTAA
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Protein sequence | MDNDPLESLA QRIAHMHGAL EASQKIQNAL VERAERQGGE TPFTLFERHA LLDQQLRRSR QALRHARRAL EHERSHHQQT LRQQRVESLR HHTIVEHASD AILQVNGEGD ILYSNPAAHK LFGYDEAALA KTPLSTLFPN QHQSRSQSVT LSLRQDAGHD HALAWTALRN DGGLIDVGAF ISPVEAEDQA LYTLILHDLS LQLRLHQAQE ESRDQALTSD RIWTQLLDRM TEQLRTPLHN LAGLLELLQS NPQKAAQQGY LESARTTVSE LLQQLQMLPN HTTLLSAPLA GERLTFDLLQ MLEGTTRQWA SVAQQKGLQL LCMVPPQLPA IWEGDLTRLR QVVGGLLERS VGATQQGTVC LSLHAQQQPN SSWYELEICI ADSRPPMQTE QMIALQQFLR QEGQAGPLHD GAETLSLAII RQLAGFMRGR LEFAFDHERG ESRFILSLPL LPGPQPSQPL TRELLGRRIL ILEPYPAYAN YLATLCQQWG MVAHSTSSEA QAIATWQGLQ QLGMLPEFML APPANPDQPA PWRDAPAGTL HLLTLTRGPT PNQPASLCKP LSRQALYEAL TQQRQDAPAA SPALPSHITN PLRQDRLLLV EDNPINQKVA LGMLKRFGFQ ATVVDRGAKA LQAVKEHPFD LILMDIQMPE MDGYATTAAI RHWERESGTP RQPISALTAN AMSGDRELCL AADMDDYLSK PLKQEALWDL LKRWLNDLPE HPPMLERSPL AEPATLAPPL PAAKPAEKPV EAEPASNPTT RCLDHGKLDE LERMMSVMEN GFQELLSRYL SDTPVLLQNL AAAVEAQDAK QARQLAHNLK STSASLGAKL LSVQAQQIEA LSKQGQTALI PPLLPDLLHH FQQAAREMAQ RLSLTSSGSG DVPQSQKACV SANFNTALG
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