| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2474 |
|---|
| Symbol | |
|---|
| ID | 4483722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3153368 |
|---|
| End bp | 3154120 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639723222 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866380 |
|---|
| Protein GI | 117925763 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.030274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.489953 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGGA TCAGCTATCT CCTGCGGGGG CTGAAAATGC TTTTCCATCC ACGGGTGCGC
CCCTTTGTGG CGGTGCCTTT GCTGCTCAAT TTTACCCTGT TTGGTGTGGG GTTTTATTAT
CTGTTTGATC TGGTCGGCTA TCTGCGTGCC GAGGTGGCGG CTTGGTTGCC CGGTTGGCTA
TCATGGCTCT CTTTCCTGGT TTTACCTACG GTGTTGGTGT TGGCGCTGTT GGTGATTTTT
TATGGCTTTA CCGTGATTGC CAACTTAATA GGTTCCCCCT TTAATGGGGT GTTGGCACAG
CGGGTAGAAG AGGTGGCAAA AGGTCAGCCC CCGATCATTA GCAATGCTGA ATCATGGATG
ACGGTACTCA AGGGTGCTGC ACAGGCGATT TTTAATGAGA TTGGCAAACT GTTTTATATG
CTCAAATGGC TGATTATTGG GATTTTATTG TCTCTTTCCG CCATCGTGAG TGTGGTCTTG
GCGCCGTTGA TACCCGTGCT GCTGTTTTTG ATCGCCGCTT GGTTGATGGC GGTGGAGTAT
GCCGACTATG CCACCGACAA CAATGGGTTG CGGGGGCGGC AAAGTCGTAC CCTGTTGCGG
CGGAATAAAA TGCATGCCTT GGGCTTTGGC AGTGCGGCGG TGTTGATGAC CTGGGTGCCG
CTGCTCAATC TGCTGGCAAT GCCTGCCTCG GTAGCGGGGG CTACCCTTAT GTGGGTGGAG
CAGTTAGAAA AATCCTGGCA GCAAGAGGCG TAG
|
|---|
| Protein sequence | MQGISYLLRG LKMLFHPRVR PFVAVPLLLN FTLFGVGFYY LFDLVGYLRA EVAAWLPGWL
SWLSFLVLPT VLVLALLVIF YGFTVIANLI GSPFNGVLAQ RVEEVAKGQP PIISNAESWM
TVLKGAAQAI FNEIGKLFYM LKWLIIGILL SLSAIVSVVL APLIPVLLFL IAAWLMAVEY
ADYATDNNGL RGRQSRTLLR RNKMHALGFG SAAVLMTWVP LLNLLAMPAS VAGATLMWVE
QLEKSWQQEA
|
|---|
| |