| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2458 |
|---|
| Symbol | |
|---|
| ID | 4481905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 3140493 |
|---|
| End bp | 3140942 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639723206 |
|---|
| Product | 50S ribosomal protein L9P |
|---|
| Protein accession | YP_866364 |
|---|
| Protein GI | 117925747 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0359] Ribosomal protein L9 |
|---|
| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.174518 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAA TCCTTCTGGA AAAGATTGGT AAGATCGGCA ACCTCGGCGA AGTGGTCAAG
GTGCGTTCCG GTTATGGTCG TAATTTTCTC ATCCCCCAAG GTAAGGCTCT GCCTGCTACG
AGTGAGAATA AATCGGTTTT TGAAGCGCAA CGTGCCGACT ATGAAGCACG CCAAGCTGAG
ATCCTTGCGG ATGCCGAAAC GTTGGCCGCT AAGGTAGACG AAGTATCGGT GGTTATGAAA
CGCCCCGCCG GTGCCATGGA CAAGCTGTTT GGTTCTGTGA CCAGTGCTGA CATTGCGGTA
TTCTACAAAG ATTTGGGGCT TAACATTCCC CGTAACATCA TCGACGTGCT GACCCCTATC
CGTACCCTGG GTGAGCATCA GGTGCGTGTA CGTTTACACC CCGATGTGGT GCGTGTTATT
AGCATCCAGG TTGAGCGTGC CGTCAAGTAA
|
|---|
| Protein sequence | MEVILLEKIG KIGNLGEVVK VRSGYGRNFL IPQGKALPAT SENKSVFEAQ RADYEARQAE
ILADAETLAA KVDEVSVVMK RPAGAMDKLF GSVTSADIAV FYKDLGLNIP RNIIDVLTPI
RTLGEHQVRV RLHPDVVRVI SIQVERAVK
|
|---|
| |