| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2456 |
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| Symbol | |
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| ID | 4481903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3136544 |
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| End bp | 3139930 |
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| Gene Length | 3387 bp |
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| Protein Length | 1128 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639723204 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_866362 |
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| Protein GI | 117925745 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.165433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTT ACGCTCATTT TTTTATGAGC CCCGCGCAGC GAGGGGTGGC CGTTTACGAG
GGTATCTATG ATCCGCTGTT GGTGACGCTG TCGGTCTTAA TCGCGGTGTT TGCGGCCTAC
ACCGCTTTTC AACTCTCCAG TCGGTTGCGT GATAGCGAAA ATGCCAAGGT TTTATTGGCG
TGGCGAGCAG GTGGTGCGCT GGCTTTGGGG ATGGGCATAT GGGCCATGCA TTTTGTCGGC
ATGCTGGCTT TTCGCTTGGA GTGCGGTGTT GCATACGATT TATGGATTAC TTTTATCTCA
ATATTACCGG GTTTTGGGGC CGCTTGGTTG GCGCTTGGGG TGTTGGGGCG GGCGACTCTC
TCTTGGCCTC TCCTTGTTAG CCGTGGGGTG GTCATGGGGG CTGGTATTGG CACCCTGCAC
TATACCGGTA TGGCCGCTTT ACAGATGGAT GCCATTTTAC GCTACGACCC CTGGCTTTTT
ATGCTCTCGG TGGTGGTGGC CATCTTGTTG GCGGTGGTGG CTTTGTCGGT AAAATCGTTT
TTGCAGTATC GCACGGCGCT GGGTCCGGGT CATCTCTCAT CCTTGATCGG TGGCGTTATC
ATGGGGGGCT CGATTAGTGG TATGCACTAT ACCGCGATGG AGGCCGCCTA CTTTATCCCG
CAGGGTGAGA CGGGGGTGGC CGTTTATAAC AGCCCCTTGC CCTTGGCCAT ATCGGTGGCC
GTTGCCACCC TTACCTTGTT GTTAATTGCC TTGGGCAGCG CGTTAGCCAG TCGCCGTATC
GCCCACAGCC GACGTTGGAT GAACTCCATT TTGCAAAACA TGAGTCAGGG TTTTGTGATG
ATGGATCTAC AGGGTAGGAT TCTGGAGGCG AATCCGGCAT TGCTCTCTTG GGTTGCGCTG
TCGCCCAGTC AGGTGCAGGG TGAACCCTTT CAAAAGCTCT TAAGTGTGCA GGATCATCAG
CCTTTGCAGT TGGCTTTGCA GCAGCTGTTA GAGGGACAAC CTGTGCGCTG TGCCTTGTCA
CTCTGTTGTC TCGATGCCCC ACCCATTCCT GTGCAGATGC ATGGCAATAC GCATCGTGAC
GAGGAGGGGC AGATTATGGG TATTTACGCC ATATTAACCG ATATTCGAGC CGAGCAGGCG
GCGGCCAAGG CACTGCGTGA TGCAAGGGAT GCCGCTGAAC AGGCCAGCCA AGCAAAAGGT
GAGTTTTTGG CCAATATGAG CCATGAAATT CGCACGCCGA TGAACGCCAT TTTAGGCATG
ACCCATCTTT GCCTACAGAC AGACCTCAAC GAACGGCAGC GACACTTTTT GGAAAAGGTT
TACGCAGCAG GTAGCGCGCT GTTACGCATT TTAAACGATA TCCTAGATTT TTCCAAAATT
GAGGCTGGTA GTCTGGAGAT CGAGAAAACC AGCTTAAAGA TGGATGAGGT GCTCGCCTCG
CTGGCCGATC TTATGTCCAT ACGTGCGGAT GAAAAAAAGA TCGAGTTACT GTTTCATCGC
GATGCCAATT TGCCGGAAAT CTTGGTGGGA GACCCCTTAC GGTTGGGTCA GGTATTGATC
AATCTGGTTG GCAATGCGCT TAAGTTCACC GAGCAGGGTG AGGTGGTGGT GCGCATTGAG
GTCATTCAGA GCGCTGAGCG GCAAGTTAAG GTGCGCTTTT CGGTGAAAGA TACCGGTATC
GGTTTAACAA ATGAGCAGAT GTCTAATATT TTTCAATCTT TTAAACAAGC CGATAGCAGT
ACAACCCGAC GATATGGCGG AACCGGCCTT GGTTTGGCAA TCAGTCATAG GTTGGTGCAG
TTGATGGGGG GTGTGTTGAA GGTGGAGAGT ACCCCAGGTC AGGGTAGTTG TTTCAGCTTT
ACGTTGGATC TGGGCGTTAC ACAACCGACA TCGCTGCTAT CGCGTCTACA GTTGCCCTCC
GGTTTGCAGG TGTTGGTGGT GGACGACAAT GTGCTTTCGC AACATATTTT GCACGATATC
CTGCAAGGGT TTGGTTGTCA GGTGCAGGTG GCTTCATCGG GTGAAGAGGC GTTGCTGCTG
CTGGCCCAGT TGGAGGGTCC GTTTGATTTT ATTCTCATGG ATTGGCAGAT GCCTGGGCTT
AATGGCATAG AGACCGCGCA GCGCATTTAC CAGAAATTTG CCAAGGTAGA GATGCCAACC
ATAATTATGG TTACCGCCCA TGGTCGTGAA GAGGTCATGC AGAAGGCGCG GGAGGCTAAA
CTCGACGGTT TTTTAATGAA GCCCGTTAAC CCCTCCATGT TATTAGAGGT TATTTTGCAA
CTGCAACGTA AGCGGCATGG CACAGGGCCG CTGCTTGAGT CGCGATCTGA GCAGAAAAAT
TTTCGCATTG AGGTGCCCAA TTTGCAGGGT AAGCACATCT TATTGGCGGA GGATAATGAC
CTTAATGTGG AGGTGGTGCA GGAAATGTTA TCCCCGTCTG GGGTCACGTT AAGCTGTGTC
AGCAATGGAC TGCGAGCCGT GGAGGCGGTG CAAAAGCGCT CCTATGATTT GGTGTTGATG
GATTTGCAGA TGCCTGTGAT GGATGGCCGT GAGGCGACCA AGCAAATTTT GGGATTGGGA
CTTGATCAGC CCCCCCCGAT TATTGCGTTA ACGGCCAATG CGTTGAGCGG AGATCGAGAG
CGCTGTATGG CGCTGGGTAT GGTGGATCAT ATTGCTAAAC CCCTGGTTCC TGAGCTGTTC
TATGCCACAA TAAAGCGGCA TCTTGGTGAT GTGACGACAC GGGTGGTGCG CTCAGTGGCG
CCAGCGCCAG AACTGCCCAG TGGGGCTCCC CCAGGGGTGG ATTTGGAGCA GGCTTGGCTT
GGGTTAAACC GCAATACCTT GTTGCTAAAT AAGCTATTGC ATGGGGTATG TGATCAGTGG
CCTGAGCAAA TGAGGCTGTT GGAGGGGTGG CTGGCGGACC CGCAGTCGCA CCATTTGGCC
ATTAACCAAG CGCATGGTCT GCGCGGGCTG GCGAGCCAAC TGCGCATGGA GAAGGTGGCC
ACCCTTGCAG GGCGTTTGGA ACAAGGGCTC AAGCAGGGTG AAGCCAATAT GGAGGCATGT
TTGGCGCCGT TGCAACAAGC GGTGATGGTG GTGGTTAACT GGTTAAAAGA GAATCTGGAT
ACACCCCCCC CAGAGCCCCC AAGGCGCGAT GCGACTGCAC TGGATATGGA TAAGGCGGCA
TTGAAAACGC AGGTGGCAGA GATCATGATC CATTTGGACC AAGATCTGGC CGAGGGGTTA
CGTCAACTGC GGGAGGTGCT TAATCGTATG CCCTCTGGCG AGCCGGAAGC TCTGTTACGC
GAGGCGCTTA ATCACGCAGA AGGGTTTGAT GTGCCAGAGG CAAAAGCCGC GTTAATGGCG
CTTCAGGCAA TGTTGCAAAA GGGGTGA
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| Protein sequence | MDFYAHFFMS PAQRGVAVYE GIYDPLLVTL SVLIAVFAAY TAFQLSSRLR DSENAKVLLA
WRAGGALALG MGIWAMHFVG MLAFRLECGV AYDLWITFIS ILPGFGAAWL ALGVLGRATL
SWPLLVSRGV VMGAGIGTLH YTGMAALQMD AILRYDPWLF MLSVVVAILL AVVALSVKSF
LQYRTALGPG HLSSLIGGVI MGGSISGMHY TAMEAAYFIP QGETGVAVYN SPLPLAISVA
VATLTLLLIA LGSALASRRI AHSRRWMNSI LQNMSQGFVM MDLQGRILEA NPALLSWVAL
SPSQVQGEPF QKLLSVQDHQ PLQLALQQLL EGQPVRCALS LCCLDAPPIP VQMHGNTHRD
EEGQIMGIYA ILTDIRAEQA AAKALRDARD AAEQASQAKG EFLANMSHEI RTPMNAILGM
THLCLQTDLN ERQRHFLEKV YAAGSALLRI LNDILDFSKI EAGSLEIEKT SLKMDEVLAS
LADLMSIRAD EKKIELLFHR DANLPEILVG DPLRLGQVLI NLVGNALKFT EQGEVVVRIE
VIQSAERQVK VRFSVKDTGI GLTNEQMSNI FQSFKQADSS TTRRYGGTGL GLAISHRLVQ
LMGGVLKVES TPGQGSCFSF TLDLGVTQPT SLLSRLQLPS GLQVLVVDDN VLSQHILHDI
LQGFGCQVQV ASSGEEALLL LAQLEGPFDF ILMDWQMPGL NGIETAQRIY QKFAKVEMPT
IIMVTAHGRE EVMQKAREAK LDGFLMKPVN PSMLLEVILQ LQRKRHGTGP LLESRSEQKN
FRIEVPNLQG KHILLAEDND LNVEVVQEML SPSGVTLSCV SNGLRAVEAV QKRSYDLVLM
DLQMPVMDGR EATKQILGLG LDQPPPIIAL TANALSGDRE RCMALGMVDH IAKPLVPELF
YATIKRHLGD VTTRVVRSVA PAPELPSGAP PGVDLEQAWL GLNRNTLLLN KLLHGVCDQW
PEQMRLLEGW LADPQSHHLA INQAHGLRGL ASQLRMEKVA TLAGRLEQGL KQGEANMEAC
LAPLQQAVMV VVNWLKENLD TPPPEPPRRD ATALDMDKAA LKTQVAEIMI HLDQDLAEGL
RQLREVLNRM PSGEPEALLR EALNHAEGFD VPEAKAALMA LQAMLQKG
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