Gene Mmc1_2453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2453 
Symbol 
ID4481900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3129245 
End bp3132154 
Gene Length2910 bp 
Protein Length969 aa 
Translation table11 
GC content51% 
IMG OID639723201 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_866359 
Protein GI117925742 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.19952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.304956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGC ATTCACACGA TGATGTCGGC CATTTTGACC GTAAGCTCGC CGTAAGCTTT 
GGTGCTGTGG TGCTGCTGGT CATGCTGACG GTAAGCGCTG TCTCGTGGTA TGCCTTTGAT
GCCATTATGA AAGATCAAGA GGCGCGTTTA GCCCGCATTA TCGGCAGCGT GGTGGGTGAG
GCCGTGGGCA GGGTCAGCTT TTCGGGCAAG CACCACACAC GCCTTTTGGT TAAAGATCTT
ATTGCCAAAA ACCCCCAGTT TAGCCATATC GGTGTGATCA ATTTAGAGGA CCAAATCATC
GCCCACAGCA ACGACCAACT CAATGATCGC CCCATGCTCT GGCCACAGGG CATGAGTCTG
CAAAAAGCGC TCACCGAACC CAACCAAGTC TACCATTTTT CCCTATTTGG ACGACCTACC
GTAAGAGAGC TCTTTTTACC CTACCACAGC GGTTTTAATA ACCGCTTGGC GGGTATTATC
CATATTGGTA TCCGTCAAGA TGCCACCACA CGCGCCCTTA AAAGCGGTTT TCTAAGCCTG
CTCTCGATGA TTGCACTGCT CACCATGGGT GCCATGATTT TGGTCCACCG CCTGAGCAAA
CGCTACAGCC GACCGGTTAA ACGGCTGGCC AATCAAATGG CCGCATTATT GGAACATGCG
CCCATGTTGA TTGCCATTCA AAAAGGGCAA CAACAACCCC ATGTAACCAG CCGTCTGTGG
CATCAATTTT ACCGGACGCA TCCTCTGCCT GACCAACCTC CACTCCACCC CTTATTACCC
ACCAAGCAAG AGGATCTTAC AAAAATAAAC AGTTCCGCTC AGGAGTTAAA CGTCACCTTG
GATGGGCATG AATACCACTT TTTGTTCACC CGCTTTATAC TGAGCGAAGA GCTGCAAGAG
CATGCACAGC CGCAGATCTG TACCATTGCC CTCGATATTA GTGACCATAA GCTGGTAGAA
CGGCAACTGA GCGAAAGCGA AAACCGTTTT CACTCTTTGG TCAGCAATCT GCCTGGTGCC
GTCTATCGCT GCAACCTAGA TAGTGCTTGG AGCATGCTCT TTATCAGCGA TGGCATTGAG
CGTATTAGCG GCTACCCGAA AGAGTCCTTT ATCCACAACT TGGAGCGCTC TTTTGCCAGC
ATTATCCACA AAGACGACCT CATTATGGTC GAGCAAAAGG TGTTTGAAGG GGTCAACCTT
AACCGCAGCT ATCACATGGA GTATCGTATT ATCCACCAAG ATGGCGCTAC CCGCTGGGTC
TATGAAGAGG GACGCGCCCA TTTTGGAAAG CATGGTCAAG CACTTTGGCT GGATGGGGTT
ATTTTTGACA TAACCGACCG TAAGCAGATG GAGCATACCC TGCACCAAAA CCGTACGCGC
CTACAAGCTG CGGTTGTAGC CAGTCGGGCA GGCACCTTTT ATTACACCAT TGAAAACGAC
CAAAACAGTT GGGATGCCCG CATGCTAGAG ATCTATGGGC TTGAGGCTTC TCAATTTGAT
AATAACTATG CCGCCTGGGT ACGCTGCATC CACCCAGAGG ATCAACACAG CACAGAGCAG
GCTTTCTTCC GTGCCTTAAG CGCTTCTTAC CACACCCAAA CCTATGACAT TGAACACCGC
ATCGTGCGAC CCGATGGATC GATCCACCAT CTGCGCACCC AGGCTTGGAT CCAGCGAGAC
AGCCAGGGAA AAGCTGAACA GGTAAGTGGT CTGGTCTTTG ATATTACCGA ACAAAAAGAG
GTTGAAACCA CCCTGCGCTT GGCCCGCGAA CAGGCCGAAT CGGCCAACCG TGCCAAAAGC
GATTTTCTAG CCGCCATGAG TCATGAAATC CGCACCCCCA TGAATGCCGT CATCGGCATG
GGTGAAGTTT TGTTAGAGAC CAAATTGGAT CAAGAGCAGC GCCACTATAT CGAAACGTTG
CAGCATGCTG GCGAAGCGTT GTTAGACCTG ATTAACGCCA TCCTCGACCT TTCGAAGATC
GAATCTGGGC GTATGGAGTT GGTCGAACAA GATTTTGATC TGCACAAGAT GGTTGTCGAA
ACCTGTCAAC TTTTCCAGGT TCAATGCCGC AAACAGGGCA TTGAACTCAA TTTAAACTGG
GAGGAGAGCA ATCCTACCTA TATTCATGGC GATCAAGCCC GCATTCGGCA AATATTGTTT
AACTTAATTG GCAATGCGGT CAAGTTCACC GATGAAGGCT CGGTCACGGT AGAGATCCGC
TCCATTGAAC AAGAAAAAAC TTTACTCTTT AAAATTACCG ATAGCGGCAT TGGCATTCCC
GCAGATAAGC AAGAGACCAT TTTTCAAAAG TTTTCGCAGG CTGACTCCAG CCTTTCCCGG
CGCCATGGCG GATCGGGGCT AGGGCTAACC ATCTGTCGGC ACTTAGTGGA GCATATGAAG
GGTCGCATCT GGGTTGACAG CGAAGAGGGC CAAGGCAGTT GTTTCTCCTT TACCCTACCC
TGCCGCCCAA CGGCCCCCAA GGCCGAAATA ATTTCCAACC CCCATGATGC GCAGCAAAAA
CAATCAAAAA AAGCACGGAT TTTGTTGGTT GAGGACTCTA AGGACAATCA AATTTTAATC
CGCACCTACC TCAAGCGCGA ACCCCACAGC TTGGTGGTCG CCTGGGATGG CGAAGAGGCC
TTAACCCGCT TTAATGAAGA TGGCCCTTTT GATTTGATTT TCATGGACAT GCAGATGCCT
ATTATGGATG GTTATGCCGC CACCGCCCAT ATCCGCGCCT TGGAACAAGC GCGCCACCTT
ACGGCAACCC CGATTGTCGC CTTAACGGCC CACGCCCTAC AGGGCGATGA GCAGCGCAGC
TTACAGGCTG GTTGCAACGC CCACTTAACC AAGCCCATCC GCAAGGCCCA CCTGTTGGCA
GCCATCCGCG ACCATGCCAA CCCATCATGA
 
Protein sequence
MSVHSHDDVG HFDRKLAVSF GAVVLLVMLT VSAVSWYAFD AIMKDQEARL ARIIGSVVGE 
AVGRVSFSGK HHTRLLVKDL IAKNPQFSHI GVINLEDQII AHSNDQLNDR PMLWPQGMSL
QKALTEPNQV YHFSLFGRPT VRELFLPYHS GFNNRLAGII HIGIRQDATT RALKSGFLSL
LSMIALLTMG AMILVHRLSK RYSRPVKRLA NQMAALLEHA PMLIAIQKGQ QQPHVTSRLW
HQFYRTHPLP DQPPLHPLLP TKQEDLTKIN SSAQELNVTL DGHEYHFLFT RFILSEELQE
HAQPQICTIA LDISDHKLVE RQLSESENRF HSLVSNLPGA VYRCNLDSAW SMLFISDGIE
RISGYPKESF IHNLERSFAS IIHKDDLIMV EQKVFEGVNL NRSYHMEYRI IHQDGATRWV
YEEGRAHFGK HGQALWLDGV IFDITDRKQM EHTLHQNRTR LQAAVVASRA GTFYYTIEND
QNSWDARMLE IYGLEASQFD NNYAAWVRCI HPEDQHSTEQ AFFRALSASY HTQTYDIEHR
IVRPDGSIHH LRTQAWIQRD SQGKAEQVSG LVFDITEQKE VETTLRLARE QAESANRAKS
DFLAAMSHEI RTPMNAVIGM GEVLLETKLD QEQRHYIETL QHAGEALLDL INAILDLSKI
ESGRMELVEQ DFDLHKMVVE TCQLFQVQCR KQGIELNLNW EESNPTYIHG DQARIRQILF
NLIGNAVKFT DEGSVTVEIR SIEQEKTLLF KITDSGIGIP ADKQETIFQK FSQADSSLSR
RHGGSGLGLT ICRHLVEHMK GRIWVDSEEG QGSCFSFTLP CRPTAPKAEI ISNPHDAQQK
QSKKARILLV EDSKDNQILI RTYLKREPHS LVVAWDGEEA LTRFNEDGPF DLIFMDMQMP
IMDGYAATAH IRALEQARHL TATPIVALTA HALQGDEQRS LQAGCNAHLT KPIRKAHLLA
AIRDHANPS