| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2453 |
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| Symbol | |
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| ID | 4481900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3129245 |
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| End bp | 3132154 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723201 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_866359 |
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| Protein GI | 117925742 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.19952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.304956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGC ATTCACACGA TGATGTCGGC CATTTTGACC GTAAGCTCGC CGTAAGCTTT
GGTGCTGTGG TGCTGCTGGT CATGCTGACG GTAAGCGCTG TCTCGTGGTA TGCCTTTGAT
GCCATTATGA AAGATCAAGA GGCGCGTTTA GCCCGCATTA TCGGCAGCGT GGTGGGTGAG
GCCGTGGGCA GGGTCAGCTT TTCGGGCAAG CACCACACAC GCCTTTTGGT TAAAGATCTT
ATTGCCAAAA ACCCCCAGTT TAGCCATATC GGTGTGATCA ATTTAGAGGA CCAAATCATC
GCCCACAGCA ACGACCAACT CAATGATCGC CCCATGCTCT GGCCACAGGG CATGAGTCTG
CAAAAAGCGC TCACCGAACC CAACCAAGTC TACCATTTTT CCCTATTTGG ACGACCTACC
GTAAGAGAGC TCTTTTTACC CTACCACAGC GGTTTTAATA ACCGCTTGGC GGGTATTATC
CATATTGGTA TCCGTCAAGA TGCCACCACA CGCGCCCTTA AAAGCGGTTT TCTAAGCCTG
CTCTCGATGA TTGCACTGCT CACCATGGGT GCCATGATTT TGGTCCACCG CCTGAGCAAA
CGCTACAGCC GACCGGTTAA ACGGCTGGCC AATCAAATGG CCGCATTATT GGAACATGCG
CCCATGTTGA TTGCCATTCA AAAAGGGCAA CAACAACCCC ATGTAACCAG CCGTCTGTGG
CATCAATTTT ACCGGACGCA TCCTCTGCCT GACCAACCTC CACTCCACCC CTTATTACCC
ACCAAGCAAG AGGATCTTAC AAAAATAAAC AGTTCCGCTC AGGAGTTAAA CGTCACCTTG
GATGGGCATG AATACCACTT TTTGTTCACC CGCTTTATAC TGAGCGAAGA GCTGCAAGAG
CATGCACAGC CGCAGATCTG TACCATTGCC CTCGATATTA GTGACCATAA GCTGGTAGAA
CGGCAACTGA GCGAAAGCGA AAACCGTTTT CACTCTTTGG TCAGCAATCT GCCTGGTGCC
GTCTATCGCT GCAACCTAGA TAGTGCTTGG AGCATGCTCT TTATCAGCGA TGGCATTGAG
CGTATTAGCG GCTACCCGAA AGAGTCCTTT ATCCACAACT TGGAGCGCTC TTTTGCCAGC
ATTATCCACA AAGACGACCT CATTATGGTC GAGCAAAAGG TGTTTGAAGG GGTCAACCTT
AACCGCAGCT ATCACATGGA GTATCGTATT ATCCACCAAG ATGGCGCTAC CCGCTGGGTC
TATGAAGAGG GACGCGCCCA TTTTGGAAAG CATGGTCAAG CACTTTGGCT GGATGGGGTT
ATTTTTGACA TAACCGACCG TAAGCAGATG GAGCATACCC TGCACCAAAA CCGTACGCGC
CTACAAGCTG CGGTTGTAGC CAGTCGGGCA GGCACCTTTT ATTACACCAT TGAAAACGAC
CAAAACAGTT GGGATGCCCG CATGCTAGAG ATCTATGGGC TTGAGGCTTC TCAATTTGAT
AATAACTATG CCGCCTGGGT ACGCTGCATC CACCCAGAGG ATCAACACAG CACAGAGCAG
GCTTTCTTCC GTGCCTTAAG CGCTTCTTAC CACACCCAAA CCTATGACAT TGAACACCGC
ATCGTGCGAC CCGATGGATC GATCCACCAT CTGCGCACCC AGGCTTGGAT CCAGCGAGAC
AGCCAGGGAA AAGCTGAACA GGTAAGTGGT CTGGTCTTTG ATATTACCGA ACAAAAAGAG
GTTGAAACCA CCCTGCGCTT GGCCCGCGAA CAGGCCGAAT CGGCCAACCG TGCCAAAAGC
GATTTTCTAG CCGCCATGAG TCATGAAATC CGCACCCCCA TGAATGCCGT CATCGGCATG
GGTGAAGTTT TGTTAGAGAC CAAATTGGAT CAAGAGCAGC GCCACTATAT CGAAACGTTG
CAGCATGCTG GCGAAGCGTT GTTAGACCTG ATTAACGCCA TCCTCGACCT TTCGAAGATC
GAATCTGGGC GTATGGAGTT GGTCGAACAA GATTTTGATC TGCACAAGAT GGTTGTCGAA
ACCTGTCAAC TTTTCCAGGT TCAATGCCGC AAACAGGGCA TTGAACTCAA TTTAAACTGG
GAGGAGAGCA ATCCTACCTA TATTCATGGC GATCAAGCCC GCATTCGGCA AATATTGTTT
AACTTAATTG GCAATGCGGT CAAGTTCACC GATGAAGGCT CGGTCACGGT AGAGATCCGC
TCCATTGAAC AAGAAAAAAC TTTACTCTTT AAAATTACCG ATAGCGGCAT TGGCATTCCC
GCAGATAAGC AAGAGACCAT TTTTCAAAAG TTTTCGCAGG CTGACTCCAG CCTTTCCCGG
CGCCATGGCG GATCGGGGCT AGGGCTAACC ATCTGTCGGC ACTTAGTGGA GCATATGAAG
GGTCGCATCT GGGTTGACAG CGAAGAGGGC CAAGGCAGTT GTTTCTCCTT TACCCTACCC
TGCCGCCCAA CGGCCCCCAA GGCCGAAATA ATTTCCAACC CCCATGATGC GCAGCAAAAA
CAATCAAAAA AAGCACGGAT TTTGTTGGTT GAGGACTCTA AGGACAATCA AATTTTAATC
CGCACCTACC TCAAGCGCGA ACCCCACAGC TTGGTGGTCG CCTGGGATGG CGAAGAGGCC
TTAACCCGCT TTAATGAAGA TGGCCCTTTT GATTTGATTT TCATGGACAT GCAGATGCCT
ATTATGGATG GTTATGCCGC CACCGCCCAT ATCCGCGCCT TGGAACAAGC GCGCCACCTT
ACGGCAACCC CGATTGTCGC CTTAACGGCC CACGCCCTAC AGGGCGATGA GCAGCGCAGC
TTACAGGCTG GTTGCAACGC CCACTTAACC AAGCCCATCC GCAAGGCCCA CCTGTTGGCA
GCCATCCGCG ACCATGCCAA CCCATCATGA
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| Protein sequence | MSVHSHDDVG HFDRKLAVSF GAVVLLVMLT VSAVSWYAFD AIMKDQEARL ARIIGSVVGE
AVGRVSFSGK HHTRLLVKDL IAKNPQFSHI GVINLEDQII AHSNDQLNDR PMLWPQGMSL
QKALTEPNQV YHFSLFGRPT VRELFLPYHS GFNNRLAGII HIGIRQDATT RALKSGFLSL
LSMIALLTMG AMILVHRLSK RYSRPVKRLA NQMAALLEHA PMLIAIQKGQ QQPHVTSRLW
HQFYRTHPLP DQPPLHPLLP TKQEDLTKIN SSAQELNVTL DGHEYHFLFT RFILSEELQE
HAQPQICTIA LDISDHKLVE RQLSESENRF HSLVSNLPGA VYRCNLDSAW SMLFISDGIE
RISGYPKESF IHNLERSFAS IIHKDDLIMV EQKVFEGVNL NRSYHMEYRI IHQDGATRWV
YEEGRAHFGK HGQALWLDGV IFDITDRKQM EHTLHQNRTR LQAAVVASRA GTFYYTIEND
QNSWDARMLE IYGLEASQFD NNYAAWVRCI HPEDQHSTEQ AFFRALSASY HTQTYDIEHR
IVRPDGSIHH LRTQAWIQRD SQGKAEQVSG LVFDITEQKE VETTLRLARE QAESANRAKS
DFLAAMSHEI RTPMNAVIGM GEVLLETKLD QEQRHYIETL QHAGEALLDL INAILDLSKI
ESGRMELVEQ DFDLHKMVVE TCQLFQVQCR KQGIELNLNW EESNPTYIHG DQARIRQILF
NLIGNAVKFT DEGSVTVEIR SIEQEKTLLF KITDSGIGIP ADKQETIFQK FSQADSSLSR
RHGGSGLGLT ICRHLVEHMK GRIWVDSEEG QGSCFSFTLP CRPTAPKAEI ISNPHDAQQK
QSKKARILLV EDSKDNQILI RTYLKREPHS LVVAWDGEEA LTRFNEDGPF DLIFMDMQMP
IMDGYAATAH IRALEQARHL TATPIVALTA HALQGDEQRS LQAGCNAHLT KPIRKAHLLA
AIRDHANPS
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