Gene Mmc1_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2428 
Symbol 
ID4480992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3096919 
End bp3098274 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content54% 
IMG OID639723176 
Producthypothetical protein 
Protein accessionYP_866334 
Protein GI117925717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGAA ACTCTGTCGA GCTTGTGCTC GATCCGATTC TTTACGCTAA ATGCTTGAGC 
TCTCTCATGA AGCAGATACT CTGCGTCTCA CCCTATTATC TCCCCTTTAA TACCCCCGAC
ATGCAACGTT TGCGCATGCT TACCCCCCTC ATGGGCCAGC ATGGTTGGCA ACCCACCCTG
CTTACCGTGG CGCCACACCA TCATCCTATC CCACCGGACC CTACCGCAGA GCCCCTTGGG
AATATACCCA TCCACGCCTG TGCCGCGCTG CCATACCGCG TCACACGCTA TCTGGGGCTG
GGTAATTTGG GTTTGCGCTG CTGGCCCTAT CTGTTGCTGG CGGGGCTCAA GCTTTTGCGT
CAACAGCCCT TTGATCTGGT CTATTTTAGC ACCACCCAGT TTGACGCCAT CAGTGTTGGC
CCGCTCTGGA AACGCTTAAC GGGGGTACCC TTTGTGGTGG ATCTACAGGA CCCCTGGCGC
AACGATTTTC ATCTTACCCG TCCCCGCCAC GAACGACCCG CCAAATTTTG GTTTGATTAC
CCTCTAAAAA AATTGACCGA AGGCCTGACC ATGCCCCACG CCTCGGGCAT GACCGCCGTA
ACCGCCAACT ATCTGCACAC CATGCAGCAA CGCTACCCCA CCCTGCACGA CTGCCCTGCC
CTAGAGCTTC CCTTTGGTGG TAGCTTGGCA GATTTTGCAA GAGCCCGCCA CCAAGCACCA
CACCCTTTTT TTGACCCCGC CAAGACTGGC TTTCGTGTGG TCATGACCGG GGCCATACCC
ACCCACATGC AATGGGGTAT GGCGCGTTTT TTACGTGCCA CCAAAAAACT CGACCAAGCG
GGCCTGTTAC CCGAGGGATT TCATATTTAT CTGATTGGTA CCAACTACGC ACAAGGCCCA
ACCGACCAAC CACCCATTCA AGCGATGGCC CATGCGTTGG GTATCGGCCA TCGCCTCACT
GAGCAGCCAC AGCGGATAGG TTTTCTACAA ACCCTTAACC TGATGCAGCA AGCTGACCTG
CTCTTATTAC CCGGCCAGAG AGAACCAAAC TACACCCCAT CCAAAATTTA CCAATATGCC
CTTAGCGGCA CACCAACCCT CGCGTGGTTT CATGAACAAA GCCATCTATG CCATATGTTT
GAAACGCTCC ACGCTGGCAC GCTGCACACC TTTAACCATG CCACCTTGGA GCAAACCCTG
GAGATACAAC TACAAGAGAG CTTACTCGCC TGGATAAACA GAACAACCGG CTGGAAAGGC
TATCACGCTG AGACGGTGCA GCAATTTGAG GCAACCGCAC TGGCCAAAAA ATTGTGCCGC
TGGTTCGATG AGATCATTGC CACCAACGGA CCCTAA
 
Protein sequence
MIRNSVELVL DPILYAKCLS SLMKQILCVS PYYLPFNTPD MQRLRMLTPL MGQHGWQPTL 
LTVAPHHHPI PPDPTAEPLG NIPIHACAAL PYRVTRYLGL GNLGLRCWPY LLLAGLKLLR
QQPFDLVYFS TTQFDAISVG PLWKRLTGVP FVVDLQDPWR NDFHLTRPRH ERPAKFWFDY
PLKKLTEGLT MPHASGMTAV TANYLHTMQQ RYPTLHDCPA LELPFGGSLA DFARARHQAP
HPFFDPAKTG FRVVMTGAIP THMQWGMARF LRATKKLDQA GLLPEGFHIY LIGTNYAQGP
TDQPPIQAMA HALGIGHRLT EQPQRIGFLQ TLNLMQQADL LLLPGQREPN YTPSKIYQYA
LSGTPTLAWF HEQSHLCHMF ETLHAGTLHT FNHATLEQTL EIQLQESLLA WINRTTGWKG
YHAETVQQFE ATALAKKLCR WFDEIIATNG P