Gene Mmc1_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2407 
Symbol 
ID4482176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp3072877 
End bp3074379 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content59% 
IMG OID639723155 
ProductN-acetylneuraminate synthase 
Protein accessionYP_866313 
Protein GI117925696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.378262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.284066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTGGC GGAACGATGC CACCACTTTG GCGGCCTCCT ATCACCAAGC GCCCAAGCAG 
TGGGCGCACT TTTGGCCCGA ATATCGGGAT CGCTATTTTG ATGAAACGGT CTCCCCGCTG
TTTGCGCTGT GGCAGGGGCA GCGGGTGGCT TTTTTGCGCT TTACCCACAC CCCGCAGCAC
CCGTTGGGTC TAGGTGGGCG TTGTGTGGAT ATCTCGATCA ATGTAGCGCC CCAGTGGCGT
GGGCAGGGGT TGGCGGTGCC CATTCTGCGG GCGGCCTCGC GCCATCTTAA AGGGTTGGGC
ATCGACAGCG TGGTGGCCGA GGTGCGAGCC AACAATGGGG TCTCGGCACG GGTCTTTGAA
AAAGCAGGTT ATCGTTTTTT GGGGGAGAGC AGCAAAACCG TCGCCGATAC CGGAGAGCGG
GTCGCCATCT TTCGCTTTGT GGAGGATTTA ACCAGCCCAT TTTGGCGGCA GCAGGGGGTT
TATATTATTG CCGAGGCCGG TTCCAATTGG CGTATGGGGC ATCCAGCGCG GGATCTGGCC
ATGGGTAAGG CGCTTATTGA TGCCGCCGTG GTCAGCGGGG CCGATGCCGT TAAATTTCAA
ACCTATCGCC CAGAAAAGGT CTATGTGGCC AACGCGGGTC AATCCAACTA CTTGGCCGAG
TCGGGCATTA AACAGGATAT TCGCGATATT TTTGCCGATC TGGCCATGCC CTATAGCATG
ATAGAGGATC TGGCCGGGTA TTGTAAAAAA GCGGGCATTC AATTTCTCTC AACCGGTTTT
TCTGTTGAGG ATTTTCAAGC GATTGACCCC TGGGTGCCCC TGCATAAAAT CGCTTCGTAC
GAAATCAGCC ATCTGCGGCT GTTGGATCTG GCGGCCAACT CTGGCAAGCC CCTATTGCTC
TCTACGGGGG CCTCTCGTGC AGAGGATATT GCCTGGGCGG TGGAACGCTA CCATAGCCAG
GGGGGGCGTG ATCTTTGTCT GCTGCAATGT ACCGCAAAAT ATCCGGCCCC CTTGGCCACG
GTTAACAGTG CGGTGCTGCC TTGGTTACAG CGGCGTTATG GGGTCAGTGT GGGGCTCTCC
GATCATAGCC GCGACCCCAT CACCGCCCCG GTGGCGGCGG TGGCCCAGGG GGCGCGTTGT
ATTGAAAAAC ACTATACCCT GCACAATGCC CTGCCGGGTC CCGATCATAG TTTTGCCATT
ACCGCAGACG AGTTAACCCA GATGGTGCGT CGCATTCGTG AGGCCGAAGA GGTGCGGGGG
GATGGCATTA AACAGGTGCA ACCTCAGGAG CAGGAGCTGG CCGCCTTTGC CCGACGCGGG
GTGCAGGCCT TGCAGGATAT CGCCCCAGGA GAAGCCCTGT TAGAGGGGCA TAATATCGCC
ATTTTGCGCC CAGGACAGCA GCCGCTGGGG GTGCATCCCC GGCTATTGGA GCAGATGCAG
GGCCGGATTG CCCAGCGTGC CATCCCAGCA GGGCAGGGCG TGCAGCTCGG GGATTGGGGG
TAA
 
Protein sequence
MAWRNDATTL AASYHQAPKQ WAHFWPEYRD RYFDETVSPL FALWQGQRVA FLRFTHTPQH 
PLGLGGRCVD ISINVAPQWR GQGLAVPILR AASRHLKGLG IDSVVAEVRA NNGVSARVFE
KAGYRFLGES SKTVADTGER VAIFRFVEDL TSPFWRQQGV YIIAEAGSNW RMGHPARDLA
MGKALIDAAV VSGADAVKFQ TYRPEKVYVA NAGQSNYLAE SGIKQDIRDI FADLAMPYSM
IEDLAGYCKK AGIQFLSTGF SVEDFQAIDP WVPLHKIASY EISHLRLLDL AANSGKPLLL
STGASRAEDI AWAVERYHSQ GGRDLCLLQC TAKYPAPLAT VNSAVLPWLQ RRYGVSVGLS
DHSRDPITAP VAAVAQGARC IEKHYTLHNA LPGPDHSFAI TADELTQMVR RIREAEEVRG
DGIKQVQPQE QELAAFARRG VQALQDIAPG EALLEGHNIA ILRPGQQPLG VHPRLLEQMQ
GRIAQRAIPA GQGVQLGDWG