| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2403 |
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| Symbol | |
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| ID | 4482172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3066839 |
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| End bp | 3068368 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723151 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_866309 |
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| Protein GI | 117925692 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.151725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CGCAAGAGCG AGAGTCCGAA GCACGGGAGT ATGACCCCGA AGCATTGCCA
GATCTCTATC GAGAAGAGCC CTCCCATGAC GAGGGCAGCC GCCATGGCGT GCTGTTTGTG
GCCTTTTTGG GGTTGATGTT TTGGGCGCCG ATTCCTCTAG GTAGCAACCG TCCGTGGGCG
CTCTATCTGC TAGAATTTAG TATCTTTTTG CTGCTGTTTT TGTGGATTGT GAGCCAATGG
CGGCGGGGGG CGCTGCTGCC CTTACAGTTC GAGTATGAAG GCCCTTGGGT GACGCTGTTT
TTGGGTTGGT CCATCGTACC GTTGTGGGGG TTGATTCCGC TGCACGAGAA ACTGTTGGCG
CTGCTTGCGC CTGGTGGGGT GGAGGTGCGG CGTTTTGCCA ATCTGCCTTT GGATGGGCCG
CTGGTGGTGG ACCTGTTCAC GGCTTGGCAG AGCTGGATTG CGTGGATGGC TTGGCTGGGC
GCCTTTTGGC TGGTGATGGT GCTGGTAAAC AGTCGAGAGC GGGTAAAATG GGTGATGCTA
ACCCTGTTTG TCACGGGGCT CTTTCAAATC TTTTTTGGTT TGCTTACCCT GCATACGGAT
GGTTATTTTT TTCTGTGGTT TAAAGCATTA AGCACACCAG AAAAACAAGA TTTTCTAACG
GGCACCTTTG TGAACCGTAA CCATTTTGCC GGTTATCTGG AGTTTGCTAT CCCGGTGGGG
ATCGGTCTAT TGGTGGCTTG GCTGCGTTAT GCGCGGGATA TGGGACAGAG TGGCAAGGAT
AAAGTGCAGA GCTTGCTTAA TGAACTAAGC AGCTACCGTG GGCTTATTCT GGTGCTGACC
ATGGTTATGA TCTTTGGGTT GATTATGAGT CTCTCCCGGG GGGGCAACCT TGCGCTGTTT
GTGGCGCTGT TTAGTGTGGT TTTGCTGACC TTTGCCCGTC GATACCGTTC AAAACGGGAG
CGGCGCCTGT TTATTCCCTT GCTGATTATT GCCTTGGTTG GGGGGGCTTG GTTTAACCTT
GAAAAATTGA CGGGTCGCAT GCTCACCATC CAAAATAGAG AGATGGATCG TTTTGTGGTG
TACGAGGCCG TTAAAGAGAA GATTAAGGAT TACCCCTTGC TCGGCAGTGG CGGCGGCTCG
TTTGAGGTCA TTTTTCCCCT CTACCGGCCC GAGAGCATCA GTAAATTTTA TAACCATGTA
CACAACGATC ATCTGGAGTT TATTAGCGAC TATGGGCTGA TCGGATATCT TATCTGGATG
AGTGGTGTGG CGCTGTTGTG GGGGCGTATT GCGCGGGCTT TTATCAAGCG GCAAGATCCC
TTTGTGCGGG GTGTGTTGTT TGCCTCGCTG GTTTCGACGT TATCCCTTCT CTTGCACGGT
TTGGTGGACT TTAATTTACA GATTCCTGCC AATATTTTTA CTTTTTATAT TATGTTGGCG
TTGGGTTTGG TGGCCAGCCG TCTGCCCCAT CAAAGCCGTC GCCATCGCAG TACGCTAAAA
CCCTATACGA GCCTTCCGTC CAGCCTCTAA
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| Protein sequence | MSETQERESE AREYDPEALP DLYREEPSHD EGSRHGVLFV AFLGLMFWAP IPLGSNRPWA
LYLLEFSIFL LLFLWIVSQW RRGALLPLQF EYEGPWVTLF LGWSIVPLWG LIPLHEKLLA
LLAPGGVEVR RFANLPLDGP LVVDLFTAWQ SWIAWMAWLG AFWLVMVLVN SRERVKWVML
TLFVTGLFQI FFGLLTLHTD GYFFLWFKAL STPEKQDFLT GTFVNRNHFA GYLEFAIPVG
IGLLVAWLRY ARDMGQSGKD KVQSLLNELS SYRGLILVLT MVMIFGLIMS LSRGGNLALF
VALFSVVLLT FARRYRSKRE RRLFIPLLII ALVGGAWFNL EKLTGRMLTI QNREMDRFVV
YEAVKEKIKD YPLLGSGGGS FEVIFPLYRP ESISKFYNHV HNDHLEFISD YGLIGYLIWM
SGVALLWGRI ARAFIKRQDP FVRGVLFASL VSTLSLLLHG LVDFNLQIPA NIFTFYIMLA
LGLVASRLPH QSRRHRSTLK PYTSLPSSL
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