| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2397 |
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| Symbol | |
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| ID | 4482166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3054768 |
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| End bp | 3056174 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723145 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_866303 |
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| Protein GI | 117925686 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00706968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGATA CGTTTGATCT GGTGGTAATT GGTGGTGGTC CTGGTGGCTA TGTGGCGGCC
ATTCGTGCCG CGCAACTGGG CTTAAAGACC GCCTGTATTG ATAAGCGCCC AACGCTGGGG
GGCACCTGCC TGAATGTGGG CTGCATTCCT TCTAAAGCGC TGTTGCAATC CTCTCACCAA
CTAGAGACCG CCCAGCATGC CATGGCGGCC CATGGGGTAG AGATCAAAGG GGTTAAGGCC
AACTTAACCA CCATGATGCA GCGCAAGCAA GAGGTGGTGC AGGGGTTGAC CCAGGGCATT
GCCTTTCTCT TTAAAAAGAA CAAAGTCACC CACCTTATGG GCAGCGGTAC CATTGTGGAC
AGTAGCCATG TGCAAGTGAC CGCAGCGGAT GGCAGCGTAC AGACCCTAAC CACAGAGAAC
ATTCTCATTG CCAGCGGCTC CGAGGTTGCC ACCCTGCCCG GTTTGGAGAT AGATGAAAAA
CACATTATCT CGTCCACGGG TGCCCTTGCA TTGGACAAGG TGCCAAAAAA AATGGTGGTG
ATTGGTGCGG GGGTGATTGG CTTAGAACTG GGCTCGGTCT GGCGCCGCTT AGGGGCCGAA
GTGACGGTGG TGGAGTTTTT GGATGGCATC CTGCCCGGCA TGGATGGGGA GATTCGCAAA
ACCGCCCAGC GCACCCTGAG CAAACAGGGC ATGCACTTTA AACTGGGCAC CAAAGTGACC
GCAGCCAGCG TGCTTAAAAA TGGCGTCAAG CTCACCATGG AGCCGGTTAA GGGTGGCGAG
GCCGAAGAAC GACAGGCCGA CGTGGTGTTG GTGGCGGTTG GCCGCAGACC CTACACCCAG
GGGCTGGGAC TGGAAAACAT TGGGGTCACG CTGGATGAGC GGGGCTTTAT TCCCGTGGAT
CATGATCGAC AGACCACCTG CGCGGGGGTG TTTGCCATTG GCGATGTGAT CGGCGGGGCC
ATGCTGGCCC ACAAGGCCGA AGAGGAGGGC AGCGCCGTTG CCGAAGCGTT GGCTGGTCAG
GTGGCCCATG TCAACTATGA CGCCATTCCC GCTGTGGTCT ACACTCACCC GGAGATCGCC
AGCGTGGGGC AAAGTGAGGA GTCCCTTACA GCGGCGGGTA TCCCCTATAA AGTGGGTAAA
TTCCCCTTTA TGGCCAACTC GCGCGCCCGT GCCATTGGCG ATGCCGAGGG CTTTGTAAAA
ATTCTTGCCC ATGCCACCAG CGATGCCATT TTGGGGGCCC ATATCATCGG CCCCGCAGCG
GGGGATCTCA TTGCTGAGAT TGTGCTCGCC ATGGAGTGTG ACATTAGTGC CGAGGATATT
GCCCGCACCT GCCACGCCCA CCCAGGGTTG GGCGAAGCGG TTAAAGAGGC CGCTTTAGCC
GTGGATAAAC GTGCCATCCA CGCCTAA
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| Protein sequence | MSDTFDLVVI GGGPGGYVAA IRAAQLGLKT ACIDKRPTLG GTCLNVGCIP SKALLQSSHQ
LETAQHAMAA HGVEIKGVKA NLTTMMQRKQ EVVQGLTQGI AFLFKKNKVT HLMGSGTIVD
SSHVQVTAAD GSVQTLTTEN ILIASGSEVA TLPGLEIDEK HIISSTGALA LDKVPKKMVV
IGAGVIGLEL GSVWRRLGAE VTVVEFLDGI LPGMDGEIRK TAQRTLSKQG MHFKLGTKVT
AASVLKNGVK LTMEPVKGGE AEERQADVVL VAVGRRPYTQ GLGLENIGVT LDERGFIPVD
HDRQTTCAGV FAIGDVIGGA MLAHKAEEEG SAVAEALAGQ VAHVNYDAIP AVVYTHPEIA
SVGQSEESLT AAGIPYKVGK FPFMANSRAR AIGDAEGFVK ILAHATSDAI LGAHIIGPAA
GDLIAEIVLA MECDISAEDI ARTCHAHPGL GEAVKEAALA VDKRAIHA
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