| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2394 |
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| Symbol | |
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| ID | 4481945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 3044238 |
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| End bp | 3049604 |
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| Gene Length | 5367 bp |
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| Protein Length | 1788 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639723142 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_866300 |
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| Protein GI | 117925683 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0407078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCACC GTTGGATGAT CTGGGCGAGT CTGTGGTTAT GGTTGGCTTT GCTGGGCACG
GCCACCGCTG CTGAGGGTGT TATGCTAAAC GAGGCCGAGC GGGCTTGGTT GGCGGAACAC
CCCGTGGTAC GTGTGGGCAT GGATCCGGCG TTTGCCCCCT ACAGTTTTAT AGAGGATGGC
CGTTATCAGG GTATTGTCCC TGAGATGCTG CAAGCGCTTG CAGCAGAGAC TGGCTTGGTG
TTTGAAACGG TTGCCGGTTT AAGTTGGTCA GAGATTTTGG CAGGGGCCAA GGCGCGTCAT
CTGGATCTTG TGGCCTCCCT TGTACAAACG CCTGAGCGAG ATCGTTTTCT TCAATACACT
CAGATCTATC TGCCCACCCC CCTGGTTGTA ATGGCGCGTA ATGATGATAG CAGCATGAGC
AGCGCAGCCG ATTTGGTCGG CAAACGGGTG GCCTTGGTGC GTGATTATGC AACCTCTGCC
AAGCTCCTGC AGGAACACCC CGAGAGTATA CCCTATATGG TGGAGAGTGT TGCCCAAGGG
CTATTGGCCG TTTCTGTTGG GCAGGCGGAT GCCTTTGTAG GGGCGATTGG GGTGAGCGAC
TATACGGCTC GGCAAAAAGG CTTGAGCAAC CTAAAAGTGG TGGCCCCGTA CGGGGGGCTG
CAATATGGTC AACGTTTTGG GGTGCGCAAG GATTGGCCTC TGCTGGTGAG TATTTTAGAA
AAGGGGCTGG CCAGCATGAC GGAAAAACAG AAAATTGCCC TGTTTGACCG TTGGTTGCCG
GTACAAAACC AGTTGCATCC AGCTCCCGTG GCGAAAATTC CGGTCAAGCT GCAACTGGCC
CCCCATGAGC AGGCGTGGTT AAGCAATCAC CCCAAAATAC GTATCGGTGT AATGCGTGGC
TGGCCCCCTA TTGATTTTGC CGATGCCCAA GGTCGCCCAC AAGGTATTGG TACCGATACG
GTGCATCTGT TGGATGAGAT GTTGGGGGGC GGGGTTTTAG AGATTGTTTC CGATACCTGG
CCTACTCTGT ATCAACAGGT CATCGACAAA AAATTGGATG GTTTGATGGG GATCACCCCG
ACCGAAGCCC GTCGTCCTTT TTTTGAGTTT ACCGCACCCT ACATGACCAT TCCCCACGCC
ATTTTTGCCC GTAGTGACGC ACCCTATGCC ACAGGTTTAA AAAGTCTTCA GGGTAAAACC
GTGGTGGTGG AAAAGCACTT TTTTGTCGCA GATTTACTCA GGCACACTTT TCCCTCCATC
AAAATATTGG AGCGTCGTGA TACCCGCGAG GCACTCTATG CGGTCTCCAA AGGGGATGCC
TATGCGTATG TGGGAAACCG GGCTGTGGCC ACCTACATTA TTGACCAAGA GATTATTAGT
AATGTGCAAG AGATGGGGAT CGTCAGATTA AGCCGATCAG ACAATGCCAT CGGTGTTCGT
AAAGATTGGC CTATATTGCG GGATGTTTTA CAAAAGGGCT TATCCCAGAT CACCATGGCA
CAAAAACGCG AGATGGCCGC CAAGTGGGTT AAGGGCAGTG TGCAGGCACC GTTGGAATTG
CCCTTGACCA AGGGTGAGCA GCGCTGGTTG TCAGAGCACC CCCAAGTGCG TTTGGGGGTG
CGGGAAAACT GGGCCCCCTA TGACTATCAA GACCGAGCTG GGTTTCAACA GGGTATCGCG
GCCGATTATG TCGCGCTGCT GGATCGTTAT CTTACGGTAA CGATGAAGAT GCAACATATC
CGAGACGATA GCGAATGGGT ACGGATAAAA GATACACTGG ATGTATTGAC GACACTTACC
CCACAAAGCG CCAAAAGCAC GGGTATGTTG CCCACCAGCA GCTATTTACG CTTGCCTTTG
GTCATGATGA TGCGCCGGGC TAGCCCCTTG GTGGAGGGGA TTGAAGATCT AAAAGGGCGG
ACCATTTCGG TGGTGCAGGG GGTGGTGGAT ACCTACGCCC TTGCCAAACG TTACCCATGG
GTCATGTGGC GTAATATGGC CACTACCGAG CAGGCCTTGC AAGCCCTTGC CCAAGGCGAG
GTGACGGCGC ATTTGGATAC CATTCCTGCC GTTCGTGTTG CCACCGAGCG GTTGGCGTTG
GATAGCTTAC AAGTGGTGAC CCCCACCGAT TTGCAGCTCC AGCTCTCTTT TGGCGTACGG
CCAGATTGGC CAGAGTTGGT GAGTATTATC AATAAGGTCA TGCAGGCAGT CCCTCCCGCT
GAAAAGCGCG TGATTGTGCA AAGTTGGATG CGTCCGCGCA CGCAGACAGC CATGGATTGG
ATCTATTTAT GGAAGGTGGT GGGTACATTA TTGCTGTTGG CGGCGGTGGT GTTGGGGGTG
GTGCTGGTTT GGAACCGGCG TTTGAGCCAG GAGATTGAAC AGCGTAAACG GGTTGAAGAA
GAGCTTTCCA AGTTGTACCG GGCGGTGGAG CAAACCCCGG TTTCGGTGGT GATTACCGAC
CTGGAGGGGC GTGTTGAGTA TGTTAACCCA ACCTTCTGTC ACAACAGCGG TTTTGCGGAG
GATGAGGTGC TTGGCCGCAC CAATGGGTTG ATCCCGTCGG ACCACACCAG TGGCGCGGAG
TATCAGGCGC TCTGGCAACA GATTACAGCC GGTGGGGAGT GGAGTGGGGA GTTTCTTAAC
CGCACCAAAA GCGGCGGGCT GGTGTGGGAG CGGGTCTCTA TTTCGGCGGT GCGTTCCGCC
GATGGCCAGA TCACTCACTA TCTTGGCATT AAAGAAGATA TTAGCCAGAT GAAGGAGGAT
CAAGAGCGGC TGGCGCATGC CAAAGAGAGT GCCGATTTAG CCAACCGTGC CAAAAGCAGC
TTTTTAGCCA ATATGAGCCA TGAAATCCGT ACCCCCATAA ACGCCATTGT CGGCATGTGT
CATTTGGCGC AACGGATGAC GGTCGAGCCG AAATTACGGG ACTATTTGGG CCATATTCAG
GTGGCAGCCG ATACCTTGTT GGGCATTATT AATGATATTT TGGATGTCTC TAAAATTGAG
GCGGGTAAAC TTCATTTTGA GGATATCCCC TTTAAACTAG ATGAGCTTAT AAGTCGTGTA
ATGCGACTAC AAGGCTTGAA AGCGCAGGAT AAAAATGTAG AGCTGGTTAT CGACTTAGAG
CCTCAGGTGC CGCAAACTGT GGTGGGTGAT CCGCTGCGTA TTAGCCAGAT ATTGACCAAT
TTGGTCAACA ATGCCGTTAA ATTTACCGAA CAGGGCGAGG TGGTGCTCTC GGTCAAACTG
CAAGGGGTGT TTGACGGGCG TGTCACCCTG TACTTCGAGG TACGTGATAG CGGTATTGGC
ATGGAGGATG CCCAACTTCA GCGACTTTTT ACCCCATTTC AACAAGGGGA TGACTCCATG
ACCCGTCGCT ATGGGGGCAC GGGGCTGGGT TTGAGTATCT GCCAAAACTT GGTCAAGATG
ATGGGGGGCC ACTTACAGGT CGAGAGCAGG TTGTCTGAAG GGAGCCGTTT TTACTTTACG
GTCTCTCTGC CAATCCACCA GGCGCCGGCG CTTGAAAGGG TTGATCAAAC CTCTTTGAAC
CTGCGGGTAT TGGTGGTGGA CGATAACCAG ACCGTGCGCG AGGTTTTGCA GCGTATGTTG
AAATCCTTTG GCTATTGGGT GGATCTGGCT GCGGAGGGGC CGACGGGTGT GGCGCTGGTG
GAGAGTGCTC TGCAACAGGG GCAGCCCTAC GATTTGATCT TGATGGATTG GCATATGCCA
CAGATGGATG GCCTTCAGGC TAGCGAGCAG ATACGGCACT TGCAAGGGGT TCGCGCGCAA
AGAACGCCAG TCATGATTAT GGCCGCCGCA TATGGTCAAG AAGATAGCCA CACAGCGGTC
TCCGAGCCGG GCTTTGCGGG CTTTTTGGAG AAACCCACAA CCCCTGCAAA TTTATTCGGT
GCCATCATGA TCGGTTTGCA TGGCGCCCCG CAAGAAGCCC CTTCTGGGGA TGCTGGGTGG
GGGTATACGG TCCCAGACCT GTCAGGTTAT CGGGTGCTGT TGGTGGAGGA CCACCCCATC
AATCAAGCGT TGGCGCGTGA GATGCTCTCG TTGGCCAAAC TACAGGTTAT TACGGCGGAT
CATGGGCAGC ATGCCTTGGA TCTGTTGCAA GAAGCGTCTG TGGATCTCAT CTTTATGGAT
ATCCAGATGC CGGTGATGGA TGGCTTTTCT GCCACTCAAG CGATCCGCGC CGATCCCCGT
TGGCAACATA TCCCAATTAT TGCGATGACG GCCCACGCCA TGGCCGATGA TCGGCAAAAA
TGTTTGGATG GGGGGATGAA CGACCATCTG GGTAAGCCGA TTGATCCACC GTTGCTGTTT
GCCAAAATCA CCCAGTGGTT AGGGCCGCAG CAAAGGGGGA GGGCAAGCCA TGATGCAGCC
CGCAGTGGAC GGGCTCCTGT GCTGATGGGT AGACGGATTC TTATGGCCTT GGGCGGTGGC
AGCCTAGGGG ATGAAATTGA GCAGATGTTG CAGCAAAGTG GCGCTCTGGT CGAGCAGCTT
GCGACTGGCC GTGAAGATCT TAACCGTTGG CAGCCAGAGG TGGTGTTGGT AGACCGTCAG
GGTTATGAAA GCCTTTCTTC TTCCCCTCTG CCCCGTTGTT ATACCGTTTT GGTTGAGCAT
GAGGGCCATG CCACGGTTGA GCGTCCGGTG TGGGCGGATG ATTGGCTGTT GGTGCCGGTG
GAGGGGTTAA CCCTTATGGC AACGCTACAG CACGCCCTGC GGGATCAATG CGCTGGCACG
ACAGAGGGCG GGGCGGATGC CGATGCGGTG GTATTGCCCC AAGAGGATCG CCACTTTTAT
TTGCGCTGGG CGTTGGCCCA AGGGGCAGGT AACCGGGTGT TGCTCAGGCG TTTGTTGCAG
CTGTTTGTGG AAGATCATGC TCGTGATCTG GAGCTATTAG GGGCCATGAT AGCTCGGGGT
GCCATGGCCG AGGTGGCGGC GCTAGCCCAT AGGTTGGCGG GAGTGGCCGG AGGCATGGGT
GCCATGAAGT TATATGCTTT GGCAAAACGT ATGGAGCGAC ATGGGGAACA GGCTCGCCCT
TTAGCCATTA GCCGCTTGTA CCCGCTGTTG GCAGAAGAGA TGGAGGCGGT GCTGGAACGT
CTGCAAACGC TGGGGGGGGC TGCGGTTGAA TCGCCCTCCC AAGCCCAAGG TGCGCTGTTG
GATAGGGGGG AGATGCTGGA GAAATTGGTC GAGCTCAAAA GGCTCATTGA TGGCGGGCAG
ACCGATGCGG TAGAGCGTGC GGAAGAGCTG CAAGGGGGGG TGCTGGAGGA GCGGTTTAAA
AAAGATTTGG ATCAAGTGAA ACATTTATTG CAGGATTATG AGTTTGAGGC GGCCTCTAAA
CATTTGGACG CCGCTATTTT AAAATAG
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| Protein sequence | MSHRWMIWAS LWLWLALLGT ATAAEGVMLN EAERAWLAEH PVVRVGMDPA FAPYSFIEDG
RYQGIVPEML QALAAETGLV FETVAGLSWS EILAGAKARH LDLVASLVQT PERDRFLQYT
QIYLPTPLVV MARNDDSSMS SAADLVGKRV ALVRDYATSA KLLQEHPESI PYMVESVAQG
LLAVSVGQAD AFVGAIGVSD YTARQKGLSN LKVVAPYGGL QYGQRFGVRK DWPLLVSILE
KGLASMTEKQ KIALFDRWLP VQNQLHPAPV AKIPVKLQLA PHEQAWLSNH PKIRIGVMRG
WPPIDFADAQ GRPQGIGTDT VHLLDEMLGG GVLEIVSDTW PTLYQQVIDK KLDGLMGITP
TEARRPFFEF TAPYMTIPHA IFARSDAPYA TGLKSLQGKT VVVEKHFFVA DLLRHTFPSI
KILERRDTRE ALYAVSKGDA YAYVGNRAVA TYIIDQEIIS NVQEMGIVRL SRSDNAIGVR
KDWPILRDVL QKGLSQITMA QKREMAAKWV KGSVQAPLEL PLTKGEQRWL SEHPQVRLGV
RENWAPYDYQ DRAGFQQGIA ADYVALLDRY LTVTMKMQHI RDDSEWVRIK DTLDVLTTLT
PQSAKSTGML PTSSYLRLPL VMMMRRASPL VEGIEDLKGR TISVVQGVVD TYALAKRYPW
VMWRNMATTE QALQALAQGE VTAHLDTIPA VRVATERLAL DSLQVVTPTD LQLQLSFGVR
PDWPELVSII NKVMQAVPPA EKRVIVQSWM RPRTQTAMDW IYLWKVVGTL LLLAAVVLGV
VLVWNRRLSQ EIEQRKRVEE ELSKLYRAVE QTPVSVVITD LEGRVEYVNP TFCHNSGFAE
DEVLGRTNGL IPSDHTSGAE YQALWQQITA GGEWSGEFLN RTKSGGLVWE RVSISAVRSA
DGQITHYLGI KEDISQMKED QERLAHAKES ADLANRAKSS FLANMSHEIR TPINAIVGMC
HLAQRMTVEP KLRDYLGHIQ VAADTLLGII NDILDVSKIE AGKLHFEDIP FKLDELISRV
MRLQGLKAQD KNVELVIDLE PQVPQTVVGD PLRISQILTN LVNNAVKFTE QGEVVLSVKL
QGVFDGRVTL YFEVRDSGIG MEDAQLQRLF TPFQQGDDSM TRRYGGTGLG LSICQNLVKM
MGGHLQVESR LSEGSRFYFT VSLPIHQAPA LERVDQTSLN LRVLVVDDNQ TVREVLQRML
KSFGYWVDLA AEGPTGVALV ESALQQGQPY DLILMDWHMP QMDGLQASEQ IRHLQGVRAQ
RTPVMIMAAA YGQEDSHTAV SEPGFAGFLE KPTTPANLFG AIMIGLHGAP QEAPSGDAGW
GYTVPDLSGY RVLLVEDHPI NQALAREMLS LAKLQVITAD HGQHALDLLQ EASVDLIFMD
IQMPVMDGFS ATQAIRADPR WQHIPIIAMT AHAMADDRQK CLDGGMNDHL GKPIDPPLLF
AKITQWLGPQ QRGRASHDAA RSGRAPVLMG RRILMALGGG SLGDEIEQML QQSGALVEQL
ATGREDLNRW QPEVVLVDRQ GYESLSSSPL PRCYTVLVEH EGHATVERPV WADDWLLVPV
EGLTLMATLQ HALRDQCAGT TEGGADADAV VLPQEDRHFY LRWALAQGAG NRVLLRRLLQ
LFVEDHARDL ELLGAMIARG AMAEVAALAH RLAGVAGGMG AMKLYALAKR MERHGEQARP
LAISRLYPLL AEEMEAVLER LQTLGGAAVE SPSQAQGALL DRGEMLEKLV ELKRLIDGGQ
TDAVERAEEL QGGVLEERFK KDLDQVKHLL QDYEFEAASK HLDAAILK
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