Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2394 |
Symbol | |
ID | 4481945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 3044238 |
End bp | 3049604 |
Gene Length | 5367 bp |
Protein Length | 1788 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639723142 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_866300 |
Protein GI | 117925683 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0407078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCACC GTTGGATGAT CTGGGCGAGT CTGTGGTTAT GGTTGGCTTT GCTGGGCACG GCCACCGCTG CTGAGGGTGT TATGCTAAAC GAGGCCGAGC GGGCTTGGTT GGCGGAACAC CCCGTGGTAC GTGTGGGCAT GGATCCGGCG TTTGCCCCCT ACAGTTTTAT AGAGGATGGC CGTTATCAGG GTATTGTCCC TGAGATGCTG CAAGCGCTTG CAGCAGAGAC TGGCTTGGTG TTTGAAACGG TTGCCGGTTT AAGTTGGTCA GAGATTTTGG CAGGGGCCAA GGCGCGTCAT CTGGATCTTG TGGCCTCCCT TGTACAAACG CCTGAGCGAG ATCGTTTTCT TCAATACACT CAGATCTATC TGCCCACCCC CCTGGTTGTA ATGGCGCGTA ATGATGATAG CAGCATGAGC AGCGCAGCCG ATTTGGTCGG CAAACGGGTG GCCTTGGTGC GTGATTATGC AACCTCTGCC AAGCTCCTGC AGGAACACCC CGAGAGTATA CCCTATATGG TGGAGAGTGT TGCCCAAGGG CTATTGGCCG TTTCTGTTGG GCAGGCGGAT GCCTTTGTAG GGGCGATTGG GGTGAGCGAC TATACGGCTC GGCAAAAAGG CTTGAGCAAC CTAAAAGTGG TGGCCCCGTA CGGGGGGCTG CAATATGGTC AACGTTTTGG GGTGCGCAAG GATTGGCCTC TGCTGGTGAG TATTTTAGAA AAGGGGCTGG CCAGCATGAC GGAAAAACAG AAAATTGCCC TGTTTGACCG TTGGTTGCCG GTACAAAACC AGTTGCATCC AGCTCCCGTG GCGAAAATTC CGGTCAAGCT GCAACTGGCC CCCCATGAGC AGGCGTGGTT AAGCAATCAC CCCAAAATAC GTATCGGTGT AATGCGTGGC TGGCCCCCTA TTGATTTTGC CGATGCCCAA GGTCGCCCAC AAGGTATTGG TACCGATACG GTGCATCTGT TGGATGAGAT GTTGGGGGGC GGGGTTTTAG AGATTGTTTC CGATACCTGG CCTACTCTGT ATCAACAGGT CATCGACAAA AAATTGGATG GTTTGATGGG GATCACCCCG ACCGAAGCCC GTCGTCCTTT TTTTGAGTTT ACCGCACCCT ACATGACCAT TCCCCACGCC ATTTTTGCCC GTAGTGACGC ACCCTATGCC ACAGGTTTAA AAAGTCTTCA GGGTAAAACC GTGGTGGTGG AAAAGCACTT TTTTGTCGCA GATTTACTCA GGCACACTTT TCCCTCCATC AAAATATTGG AGCGTCGTGA TACCCGCGAG GCACTCTATG CGGTCTCCAA AGGGGATGCC TATGCGTATG TGGGAAACCG GGCTGTGGCC ACCTACATTA TTGACCAAGA GATTATTAGT AATGTGCAAG AGATGGGGAT CGTCAGATTA AGCCGATCAG ACAATGCCAT CGGTGTTCGT AAAGATTGGC CTATATTGCG GGATGTTTTA CAAAAGGGCT TATCCCAGAT CACCATGGCA CAAAAACGCG AGATGGCCGC CAAGTGGGTT AAGGGCAGTG TGCAGGCACC GTTGGAATTG CCCTTGACCA AGGGTGAGCA GCGCTGGTTG TCAGAGCACC CCCAAGTGCG TTTGGGGGTG CGGGAAAACT GGGCCCCCTA TGACTATCAA GACCGAGCTG GGTTTCAACA GGGTATCGCG GCCGATTATG TCGCGCTGCT GGATCGTTAT CTTACGGTAA CGATGAAGAT GCAACATATC CGAGACGATA GCGAATGGGT ACGGATAAAA GATACACTGG ATGTATTGAC GACACTTACC CCACAAAGCG CCAAAAGCAC GGGTATGTTG CCCACCAGCA GCTATTTACG CTTGCCTTTG GTCATGATGA TGCGCCGGGC TAGCCCCTTG GTGGAGGGGA TTGAAGATCT AAAAGGGCGG ACCATTTCGG TGGTGCAGGG GGTGGTGGAT ACCTACGCCC TTGCCAAACG TTACCCATGG GTCATGTGGC GTAATATGGC CACTACCGAG CAGGCCTTGC AAGCCCTTGC CCAAGGCGAG GTGACGGCGC ATTTGGATAC CATTCCTGCC GTTCGTGTTG CCACCGAGCG GTTGGCGTTG GATAGCTTAC AAGTGGTGAC CCCCACCGAT TTGCAGCTCC AGCTCTCTTT TGGCGTACGG CCAGATTGGC CAGAGTTGGT GAGTATTATC AATAAGGTCA TGCAGGCAGT CCCTCCCGCT GAAAAGCGCG TGATTGTGCA AAGTTGGATG CGTCCGCGCA CGCAGACAGC CATGGATTGG ATCTATTTAT GGAAGGTGGT GGGTACATTA TTGCTGTTGG CGGCGGTGGT GTTGGGGGTG GTGCTGGTTT GGAACCGGCG TTTGAGCCAG GAGATTGAAC AGCGTAAACG GGTTGAAGAA GAGCTTTCCA AGTTGTACCG GGCGGTGGAG CAAACCCCGG TTTCGGTGGT GATTACCGAC CTGGAGGGGC GTGTTGAGTA TGTTAACCCA ACCTTCTGTC ACAACAGCGG TTTTGCGGAG GATGAGGTGC TTGGCCGCAC CAATGGGTTG ATCCCGTCGG ACCACACCAG TGGCGCGGAG TATCAGGCGC TCTGGCAACA GATTACAGCC GGTGGGGAGT GGAGTGGGGA GTTTCTTAAC CGCACCAAAA GCGGCGGGCT GGTGTGGGAG CGGGTCTCTA TTTCGGCGGT GCGTTCCGCC GATGGCCAGA TCACTCACTA TCTTGGCATT AAAGAAGATA TTAGCCAGAT GAAGGAGGAT CAAGAGCGGC TGGCGCATGC CAAAGAGAGT GCCGATTTAG CCAACCGTGC CAAAAGCAGC TTTTTAGCCA ATATGAGCCA TGAAATCCGT ACCCCCATAA ACGCCATTGT CGGCATGTGT CATTTGGCGC AACGGATGAC GGTCGAGCCG AAATTACGGG ACTATTTGGG CCATATTCAG GTGGCAGCCG ATACCTTGTT GGGCATTATT AATGATATTT TGGATGTCTC TAAAATTGAG GCGGGTAAAC TTCATTTTGA GGATATCCCC TTTAAACTAG ATGAGCTTAT AAGTCGTGTA ATGCGACTAC AAGGCTTGAA AGCGCAGGAT AAAAATGTAG AGCTGGTTAT CGACTTAGAG CCTCAGGTGC CGCAAACTGT GGTGGGTGAT CCGCTGCGTA TTAGCCAGAT ATTGACCAAT TTGGTCAACA ATGCCGTTAA ATTTACCGAA CAGGGCGAGG TGGTGCTCTC GGTCAAACTG CAAGGGGTGT TTGACGGGCG TGTCACCCTG TACTTCGAGG TACGTGATAG CGGTATTGGC ATGGAGGATG CCCAACTTCA GCGACTTTTT ACCCCATTTC AACAAGGGGA TGACTCCATG ACCCGTCGCT ATGGGGGCAC GGGGCTGGGT TTGAGTATCT GCCAAAACTT GGTCAAGATG ATGGGGGGCC ACTTACAGGT CGAGAGCAGG TTGTCTGAAG GGAGCCGTTT TTACTTTACG GTCTCTCTGC CAATCCACCA GGCGCCGGCG CTTGAAAGGG TTGATCAAAC CTCTTTGAAC CTGCGGGTAT TGGTGGTGGA CGATAACCAG ACCGTGCGCG AGGTTTTGCA GCGTATGTTG AAATCCTTTG GCTATTGGGT GGATCTGGCT GCGGAGGGGC CGACGGGTGT GGCGCTGGTG GAGAGTGCTC TGCAACAGGG GCAGCCCTAC GATTTGATCT TGATGGATTG GCATATGCCA CAGATGGATG GCCTTCAGGC TAGCGAGCAG ATACGGCACT TGCAAGGGGT TCGCGCGCAA AGAACGCCAG TCATGATTAT GGCCGCCGCA TATGGTCAAG AAGATAGCCA CACAGCGGTC TCCGAGCCGG GCTTTGCGGG CTTTTTGGAG AAACCCACAA CCCCTGCAAA TTTATTCGGT GCCATCATGA TCGGTTTGCA TGGCGCCCCG CAAGAAGCCC CTTCTGGGGA TGCTGGGTGG GGGTATACGG TCCCAGACCT GTCAGGTTAT CGGGTGCTGT TGGTGGAGGA CCACCCCATC AATCAAGCGT TGGCGCGTGA GATGCTCTCG TTGGCCAAAC TACAGGTTAT TACGGCGGAT CATGGGCAGC ATGCCTTGGA TCTGTTGCAA GAAGCGTCTG TGGATCTCAT CTTTATGGAT ATCCAGATGC CGGTGATGGA TGGCTTTTCT GCCACTCAAG CGATCCGCGC CGATCCCCGT TGGCAACATA TCCCAATTAT TGCGATGACG GCCCACGCCA TGGCCGATGA TCGGCAAAAA TGTTTGGATG GGGGGATGAA CGACCATCTG GGTAAGCCGA TTGATCCACC GTTGCTGTTT GCCAAAATCA CCCAGTGGTT AGGGCCGCAG CAAAGGGGGA GGGCAAGCCA TGATGCAGCC CGCAGTGGAC GGGCTCCTGT GCTGATGGGT AGACGGATTC TTATGGCCTT GGGCGGTGGC AGCCTAGGGG ATGAAATTGA GCAGATGTTG CAGCAAAGTG GCGCTCTGGT CGAGCAGCTT GCGACTGGCC GTGAAGATCT TAACCGTTGG CAGCCAGAGG TGGTGTTGGT AGACCGTCAG GGTTATGAAA GCCTTTCTTC TTCCCCTCTG CCCCGTTGTT ATACCGTTTT GGTTGAGCAT GAGGGCCATG CCACGGTTGA GCGTCCGGTG TGGGCGGATG ATTGGCTGTT GGTGCCGGTG GAGGGGTTAA CCCTTATGGC AACGCTACAG CACGCCCTGC GGGATCAATG CGCTGGCACG ACAGAGGGCG GGGCGGATGC CGATGCGGTG GTATTGCCCC AAGAGGATCG CCACTTTTAT TTGCGCTGGG CGTTGGCCCA AGGGGCAGGT AACCGGGTGT TGCTCAGGCG TTTGTTGCAG CTGTTTGTGG AAGATCATGC TCGTGATCTG GAGCTATTAG GGGCCATGAT AGCTCGGGGT GCCATGGCCG AGGTGGCGGC GCTAGCCCAT AGGTTGGCGG GAGTGGCCGG AGGCATGGGT GCCATGAAGT TATATGCTTT GGCAAAACGT ATGGAGCGAC ATGGGGAACA GGCTCGCCCT TTAGCCATTA GCCGCTTGTA CCCGCTGTTG GCAGAAGAGA TGGAGGCGGT GCTGGAACGT CTGCAAACGC TGGGGGGGGC TGCGGTTGAA TCGCCCTCCC AAGCCCAAGG TGCGCTGTTG GATAGGGGGG AGATGCTGGA GAAATTGGTC GAGCTCAAAA GGCTCATTGA TGGCGGGCAG ACCGATGCGG TAGAGCGTGC GGAAGAGCTG CAAGGGGGGG TGCTGGAGGA GCGGTTTAAA AAAGATTTGG ATCAAGTGAA ACATTTATTG CAGGATTATG AGTTTGAGGC GGCCTCTAAA CATTTGGACG CCGCTATTTT AAAATAG
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Protein sequence | MSHRWMIWAS LWLWLALLGT ATAAEGVMLN EAERAWLAEH PVVRVGMDPA FAPYSFIEDG RYQGIVPEML QALAAETGLV FETVAGLSWS EILAGAKARH LDLVASLVQT PERDRFLQYT QIYLPTPLVV MARNDDSSMS SAADLVGKRV ALVRDYATSA KLLQEHPESI PYMVESVAQG LLAVSVGQAD AFVGAIGVSD YTARQKGLSN LKVVAPYGGL QYGQRFGVRK DWPLLVSILE KGLASMTEKQ KIALFDRWLP VQNQLHPAPV AKIPVKLQLA PHEQAWLSNH PKIRIGVMRG WPPIDFADAQ GRPQGIGTDT VHLLDEMLGG GVLEIVSDTW PTLYQQVIDK KLDGLMGITP TEARRPFFEF TAPYMTIPHA IFARSDAPYA TGLKSLQGKT VVVEKHFFVA DLLRHTFPSI KILERRDTRE ALYAVSKGDA YAYVGNRAVA TYIIDQEIIS NVQEMGIVRL SRSDNAIGVR KDWPILRDVL QKGLSQITMA QKREMAAKWV KGSVQAPLEL PLTKGEQRWL SEHPQVRLGV RENWAPYDYQ DRAGFQQGIA ADYVALLDRY LTVTMKMQHI RDDSEWVRIK DTLDVLTTLT PQSAKSTGML PTSSYLRLPL VMMMRRASPL VEGIEDLKGR TISVVQGVVD TYALAKRYPW VMWRNMATTE QALQALAQGE VTAHLDTIPA VRVATERLAL DSLQVVTPTD LQLQLSFGVR PDWPELVSII NKVMQAVPPA EKRVIVQSWM RPRTQTAMDW IYLWKVVGTL LLLAAVVLGV VLVWNRRLSQ EIEQRKRVEE ELSKLYRAVE QTPVSVVITD LEGRVEYVNP TFCHNSGFAE DEVLGRTNGL IPSDHTSGAE YQALWQQITA GGEWSGEFLN RTKSGGLVWE RVSISAVRSA DGQITHYLGI KEDISQMKED QERLAHAKES ADLANRAKSS FLANMSHEIR TPINAIVGMC HLAQRMTVEP KLRDYLGHIQ VAADTLLGII NDILDVSKIE AGKLHFEDIP FKLDELISRV MRLQGLKAQD KNVELVIDLE PQVPQTVVGD PLRISQILTN LVNNAVKFTE QGEVVLSVKL QGVFDGRVTL YFEVRDSGIG MEDAQLQRLF TPFQQGDDSM TRRYGGTGLG LSICQNLVKM MGGHLQVESR LSEGSRFYFT VSLPIHQAPA LERVDQTSLN LRVLVVDDNQ TVREVLQRML KSFGYWVDLA AEGPTGVALV ESALQQGQPY DLILMDWHMP QMDGLQASEQ IRHLQGVRAQ RTPVMIMAAA YGQEDSHTAV SEPGFAGFLE KPTTPANLFG AIMIGLHGAP QEAPSGDAGW GYTVPDLSGY RVLLVEDHPI NQALAREMLS LAKLQVITAD HGQHALDLLQ EASVDLIFMD IQMPVMDGFS ATQAIRADPR WQHIPIIAMT AHAMADDRQK CLDGGMNDHL GKPIDPPLLF AKITQWLGPQ QRGRASHDAA RSGRAPVLMG RRILMALGGG SLGDEIEQML QQSGALVEQL ATGREDLNRW QPEVVLVDRQ GYESLSSSPL PRCYTVLVEH EGHATVERPV WADDWLLVPV EGLTLMATLQ HALRDQCAGT TEGGADADAV VLPQEDRHFY LRWALAQGAG NRVLLRRLLQ LFVEDHARDL ELLGAMIARG AMAEVAALAH RLAGVAGGMG AMKLYALAKR MERHGEQARP LAISRLYPLL AEEMEAVLER LQTLGGAAVE SPSQAQGALL DRGEMLEKLV ELKRLIDGGQ TDAVERAEEL QGGVLEERFK KDLDQVKHLL QDYEFEAASK HLDAAILK
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