| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2391 |
|---|
| Symbol | |
|---|
| ID | 4481942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3037723 |
|---|
| End bp | 3039747 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639723139 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_866297 |
|---|
| Protein GI | 117925680 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000122172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.4198 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAC TCAACTCTCT TGATAAAAAA ATTATGCTTG GCGTTGGTTT GGTGGGATTT
TTTGCCCTAT TAAGCATGGG GGGCTTTGCC ATTTATAAAA TGGAGAAAGC TGTGCTGTTT
GAAAATACAA TGGGCGTCAA CAAGCTTACC TCTGGTGTGA TCAATGGGCT GGAGAGCATC
ATGCTCTCTG GCAACTCCGA GCTGGCAAGG GACCTAGCCC AAAGACTTAG TAAAATGGAG
GATGTAAGGA GTTTCCGGAT CTTACGCTTA GATGGTCAAG AAGCCTTTGT TGAGGGGCAA
GAAGCCCCAG AAGATGCCGA GACGGGCTGG GTGGGATTTC GACATTTTGA TGCGACCAAA
GTGAGTCCTC TTTTTGCGTC GGCCGTTGAA AACAAACAAG AGGTTAGCTT TGATCACACC
GATGCCGATG GGGGCCGGCA ACGGAGTTAT CTCGTGCCCA TCCTAAATAA GGAGCCCTGC
CAGGCTTGCC ATGGAGACCA GCACGATGTG CGTGGCGTCT TAAAGATCAC CGTCTCTACG
GAAGAGATGA TCAGTAATAT TTCGCAAACT CGATTAGATC TCGCTCTTAT GCTTACTATA
AGTATTATTT TATTTTTAGT ATTACTTAAA TATATCCTTA AATTTTTAAT TATTAACCCC
GTTAATACCG TCAAAGCAAA AATGCGCGAT TTTGCTGAGG GTGAAAACCC CGACCTTACG
CAAAAACTCG ACTTCACCTC CAATGATGAG ATTGGAGAAC TGGTTTACTG GTTTAATCAA
TTTCTTGGGG TGATCAGTGA AATTGTTGAA AATGTCAAAG GCAGTGCGGT CACTCTTGAT
CAGCTTGCGT TGATATTAAA TCAAGCATCC GAACATATGA GTGCGGGGAT TGATAGTGTG
CAAACGCAAA CGATCTCCTC AACCGGTCTC ACAGAAACCA TGCGCGTACA GATGGAAGAT
GTATCCAGAG CGACGATGGG TATTGTTGCC CTGCTCGAAT CCAGCGTGGA ACGCGTGACA
GATGTCAATC AAAGCATGGT GACAATCGCG GCGGCGGCTG AGGAGGCCAA TACAAACCTA
CGGCATGTTG CAGACAGTTC AGACTCCATG AGCCAAAACA TGTCACAGAT TAAAGAGGCG
GCCAACCGGA GCAATGAAAA TTTCGATATT ATCGCCTCTT CCGTCACCTC CTTAGGGGAC
TCTTTTCAAA AAGTACGATC CCGTTGTAAA AACGCCCTTC ATGACGCCGG TCAAGCCGTT
GAACTCTCAC TAGAGACCTC TCAACTGGTT CAGCATCTTG AAGAAGCGAC AGAGACCATC
AGCAGAACAG TCGGGGAAAT TCGTCAAATT GCGGATCAAA CCAATATGCT GGCATTGAAT
GCATCCATTG AAGCTGCGGG AGCGGGTCAA GCAGGACTCG GGTTTGCTGT GGTTGCAAAT
GAAGTAAAAC AACTGGCTAG CCGCACGGCT CAAGCCACCG TTAGCATTAC AAAGGACACC
AAAAGCATTC AGGAAAGAAC AAAAAAGGCG ATCCAAGCGA CAGAACGGGT CGCAGAGATG
ATCCAAGCGT TGGGTGACAG CAATCGTAAA ATCACCGACT CAGTTGATGA GCAAAACCAA
GCTCTCGACG AAATTAGCCT TGCCATCTCG CAATCTGCCA AAGAGACCAT CGCGGTTACG
AACAGCATCA ATGCCACCTC CGAGGGTATT TCAGAAACCG CAAGGAATGT GAATGAAATT
TCATATGGGA TGGATGAGGT AACACGCAGC GTGGCCATTA TAAGCTCTCA TGTCAATGAC
TTAGCTAACG CCGTCAAGAA TGGCGCAAGG CAAGGAAAAG ATTCCATTGG AACCGTCATG
GAAGTGGCAA AATCCTCTCA GATGATTGTG GAAGCGATGG AGGCAGGCAT GCAATCCGCT
GAGGGTATCC AAGTACTTAG TAACTCAGTA CGCCAACATG CCAAAACCCT CTCTGACCTT
GGCAAAACAC TGAACAATCA GTTAGCCCGC TTTATTTGTG GTTAA
|
|---|
| Protein sequence | MIKLNSLDKK IMLGVGLVGF FALLSMGGFA IYKMEKAVLF ENTMGVNKLT SGVINGLESI
MLSGNSELAR DLAQRLSKME DVRSFRILRL DGQEAFVEGQ EAPEDAETGW VGFRHFDATK
VSPLFASAVE NKQEVSFDHT DADGGRQRSY LVPILNKEPC QACHGDQHDV RGVLKITVST
EEMISNISQT RLDLALMLTI SIILFLVLLK YILKFLIINP VNTVKAKMRD FAEGENPDLT
QKLDFTSNDE IGELVYWFNQ FLGVISEIVE NVKGSAVTLD QLALILNQAS EHMSAGIDSV
QTQTISSTGL TETMRVQMED VSRATMGIVA LLESSVERVT DVNQSMVTIA AAAEEANTNL
RHVADSSDSM SQNMSQIKEA ANRSNENFDI IASSVTSLGD SFQKVRSRCK NALHDAGQAV
ELSLETSQLV QHLEEATETI SRTVGEIRQI ADQTNMLALN ASIEAAGAGQ AGLGFAVVAN
EVKQLASRTA QATVSITKDT KSIQERTKKA IQATERVAEM IQALGDSNRK ITDSVDEQNQ
ALDEISLAIS QSAKETIAVT NSINATSEGI SETARNVNEI SYGMDEVTRS VAIISSHVND
LANAVKNGAR QGKDSIGTVM EVAKSSQMIV EAMEAGMQSA EGIQVLSNSV RQHAKTLSDL
GKTLNNQLAR FICG
|
|---|
| |