| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2384 |
|---|
| Symbol | |
|---|
| ID | 4481935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 3029924 |
|---|
| End bp | 3030283 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639723132 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_866290 |
|---|
| Protein GI | 117925673 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.68054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGG CTATGGAAGA GGATAGAGAG CCCTATCAAG CCCAATTGTT GAGCCGGCGG
GATGAATTGC TGGCCGATGC GGCCAGCGCC AGCGAAAGCC AACAGGCGGT TGAGCTAGAC
CAAACCCGCG TAGGTCGCCT ATCCCGCATG GATGCCCTAC AGATGCAGGC CATGGCAAAA
GAGAGTGGCT TACGTCGCCA ACAGGAGTTG CGCCGTATTG ATGCCGCCTT GGTGCGCCTA
ACCGATGGCA GCTTTGGCGA GTGCTTGGTG TGCGGTGGAC AGATTGCCCC CCAACGTCTG
CAATGGGACC CTAGCGTGGC AACCTGTATT GGCTGTGCCA GTCGGGCGGA ATCTCGTTAA
|
|---|
| Protein sequence | MEEAMEEDRE PYQAQLLSRR DELLADAASA SESQQAVELD QTRVGRLSRM DALQMQAMAK
ESGLRRQQEL RRIDAALVRL TDGSFGECLV CGGQIAPQRL QWDPSVATCI GCASRAESR
|
|---|
| |