| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2383 |
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| Symbol | |
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| ID | 4481934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3026387 |
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| End bp | 3029920 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723131 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_866289 |
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| Protein GI | 117925672 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.467753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCATGG ACATCAAACG TATCCTACTC TCTGCATGGT TGCTTGCTTC GCTTTTGCTG
CTCCTGATTG TGGGCCTGCT TTTTCATCGT TTTATCCAGC ATGAATTTAA CCGGCGAGCT
GAACAACACC TCCAATTTGC GCAACAGTTT TTATTGGATG AGTTAGGGCA ACGCCGCAAG
GATTTACAGC AACGGGCAGC CAGTTTGGCA CAGTCGCCCA ATATCAGCGG CCCGATGCAT
CTCATCAACC GTTACGAAGA CCCAACGCGC CGCGAAACAT TGGTTTTTGA CCAAGAAAAA
GAGCAACTTA TACATGAGGT ACTCAAGCAT ATTCATGATT TAAACAACAT CTTGGTGGTG
CTGTATGATA CCAAACAGCG CCCCATTGTG TGGATCAACC GTGAACAAAC CAAAACCTCG
GTCGGCTACC GGGGTTTTGG TCCTGATGGC GCGATCAATC TAACCCTTCA GCGCCCCGAG
CAACCATCAC CACCACCGCA GCGCGATCTT GCCGGGTTGT CACACTGGCT GAGCAAGCAC
CCCCTCTACC ACCTGATCCA TTTTGACCAG GAGATTGCTC AAGCCGAGCT TAGCCCCATG
CTCTGGCAAA GCAAGGGTGG CGAGCCCAAA CAGGCTGGTA CACTCCTGTT AATTTCCCGT
TTGGATGAGC ATTTTACCAA CCATATTCAA CTTCGTACCC ACACCCAGGT GCAGCTCTTA
CACCACAATA GCACCCTTAA CCAGAAACAA ACCGGTACGC ACCCTTTTCA AAAATTGGAC
CTTCAACAGG CTTTGACGAA GAGCCTGGAT CTCAGCCAAC TTAGCAGCGT TCCAGCAAGC
GGACACAGCC ATTGGATTGA TCATGCTGAC GCGCGATTAT CGCTGCTCCA CGCCCCCCTG
GATAATGGCG ACTTGGCGCT CTTTGGGTTT GCCTTGCCCA AGGAGCAAAT TAGCACCAGC
TTTATGGCTT TTCAGGGGGC TGCCGCGCTG GGTGGAGGCT TAACAGCCCT CATGTTAATA
CCCCTAGGAT GGTGGTTTAT CCGCCGCCAA TTGGTCAGCC CCTTACACAC CCTTTTGCAC
GAGATTCAAC AGTTTCATCA AGAAGGCCGC ATACCACCCC GGCAGATCCG TTATGGTGCC
AGCGAGTTCC GCACATTAAC GCTAGAGTTT CGCACCCTGG CGCACTCGAT CATTGAGCGT
GAAAAACGGT TACGCACCCT CTCTACTGGA CTGGAGCAAG CCCCGATATC GGTGCTTATT
AGTGACACCC AAGGCAACAT TGAGTATGTT AACCCCTATT TTGAGCAGCT TACCGGCTAT
TATTCCCATG AGGTGTTAGG CAAAAATCCC AATCTGCTTA AATCCGATCT CAATCCCCCT
GAACTGTTTC GTGATCTATG GCGTACCATC TCTGCGGGGG CCCCTTGGCG CGGCGAGTTC
ATTAACCGCA AAAAAAATGG CGCCCTGCAC TGGCAAATGG CCCACATTGC GCCGGTGTTG
GATAATGACG GGCAGATTAC CCACTTTATC GCCTTGAGCG AAGAGATAAC CGCCCGCAAA
CAAGCAGATG CCGCCCTTAA CGAGAGCAAT GAACGTTTTC GCACGTTAGC CCAGGTCTCG
CCAGTGGGTA TTTTCCAGAC CGATCATGAT GGCGAATATA TCTATGTCAA CACAACCTGG
GAGAGCATTA CCGGCACCAC CTCCCCTCAA GCGCTCAGCA GTCAGTGGGA CATTCATCTC
CATCCAGATG ATCAACCCCG GGTTCAACAG CGCTGGCAGG AGACGGTGCT CCATGGCAAC
GCTTTTCATG AAGAGTATCG TTTTCTACGT GGGGATGGCA CCATTCGCTG GGTGATCGGC
TCAGCAGCCC CCCAACGGGA CCCTGACAGG GTGATTCAAG GTTTTGTGGG TACCTTAACC
GACATTACCG AGCGTAAGCA GATGGAGTTG GAGCTGGGCA AGGAGCGTGC TTTACTACGC
TCCTTAATCG ACTCCATTCC TGATCTCATT TTTTACAAAC GGGCGGATGG CACCTACATG
GGATGTAACC GCGCCTTTGA ACTGTTTTGC AAACGTCCCG AGGCCGCCCT TATCGGCCAT
ACCGACCAAG CCCTCTTTAG CCCAGAGCTG GCCCAACTGC TCAAATCGGG GGATGAGCTG
GTCATCAACA AAAATAGCTG CTTTAGCCAC GAAGCCACGG GGCTGTTTGG GGATGGCCAC
CAAGTACCCT TTCTCATTCA AAAGTCACCC ATGCATGGTT ACCAAGGGGA GCTATTGGGA
TTAATCGGGG TGGCGCGGGA CATCACCCAA CGACTGCGTG TTGAGCAGGA GCTGCAACAG
GCCAAAGAGG ATGCCGAAGC AGCCAACCGC AGCAAGTCGG AATTTTTGGC AGCCATGAGC
CATGAAATCC GTACCCCGAT GAATGTGGTG ATCGGCATGG GGGAGATTTT ATTGGAAACC
CCGTTAAATG CCGAACAGAC CCGCTATATC AACAGCATGC AACACGCCGG GGATGCCCTA
CTGGAGTTGA TTGACAATAT CCTAGACCTC TCAAAAATCG AGGCCGGGCG CATGACCTTA
GAAGAGCGCG CCTTCAGGTT GGATACCATG GTCATTAGCA TTACCGATTT TTTCCGGCTC
CAAGCGCTTA ACCATAATCT TAGCCTTGTG GTGGAGATTG CACCGGAACT TGAGCAACAG
TATGTGCTGG GGGATGCCGG CCGGGTGCGT CAGGTGCTGT ATAATCTGCT GGGTAACGCA
CTTAAATTTA CGGAAGAAGG GGGAGTCTCT CTCCATTTAA GCCTTGATGC AAACCAGCAT
ATTCATACCC GTGTGAGCGA TACAGGTATC GGCATTGCCC CCCAGCAGTT GGAGCGTATT
TTTGATAATT TTACGCAGGA GGATTCCAGC GTCACCCGAC GTTTTGGGGG AACAGGACTG
GGTTTAGCGA TCTGCCGTCG TTTTACGGAG CTGATGGGGG GTAGGATCTG GGTTGAAAGT
ATTGAGGGAC AAGGCAGCAC TTTTCACATG ACGCTGCCCC TGGTACTAAG CCACACGCCC
TTGCATGAAA CACCGACTAC GGCTGTTATC ACCCCCTATA ATCAAGGCAT TGTAGAAGCA
CCGTGCGCGT TTACCCCAGA GCATCCGCAA CGTCCGCTCT CCATTTTGCT GGTGGAGGAT
TCTGAGGACA ATCGCACCTT GTTCAAAGCC TTTTTACAGC ACACCCCCCA CGCCCTCGTG
ATGGTCGAAA ATGGGGCCGA TGCGCTAGAG CGGGTTATTG TGGAGCGCTT TGATCTCATC
TTTATGGATA TGCAGATGCC CATCATGGAT GGCTATAGCG CCACACGTGC CATACGCCAA
TGGGAGCAGC AACGGGGCGT GCCACCACAC ATTATCTACG CCCTAACGGC TCATGCCCTG
AGCGGAGATC GGGAACGCAG TCTGCAAGCA GGCTGTGACG ACCACCTAAC CAAACCCATT
AAAAAGCGTA AATTGTTGGA GATTATTCAA CAACACGCCC AGCCCGTCGA GTGA
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| Protein sequence | MLMDIKRILL SAWLLASLLL LLIVGLLFHR FIQHEFNRRA EQHLQFAQQF LLDELGQRRK
DLQQRAASLA QSPNISGPMH LINRYEDPTR RETLVFDQEK EQLIHEVLKH IHDLNNILVV
LYDTKQRPIV WINREQTKTS VGYRGFGPDG AINLTLQRPE QPSPPPQRDL AGLSHWLSKH
PLYHLIHFDQ EIAQAELSPM LWQSKGGEPK QAGTLLLISR LDEHFTNHIQ LRTHTQVQLL
HHNSTLNQKQ TGTHPFQKLD LQQALTKSLD LSQLSSVPAS GHSHWIDHAD ARLSLLHAPL
DNGDLALFGF ALPKEQISTS FMAFQGAAAL GGGLTALMLI PLGWWFIRRQ LVSPLHTLLH
EIQQFHQEGR IPPRQIRYGA SEFRTLTLEF RTLAHSIIER EKRLRTLSTG LEQAPISVLI
SDTQGNIEYV NPYFEQLTGY YSHEVLGKNP NLLKSDLNPP ELFRDLWRTI SAGAPWRGEF
INRKKNGALH WQMAHIAPVL DNDGQITHFI ALSEEITARK QADAALNESN ERFRTLAQVS
PVGIFQTDHD GEYIYVNTTW ESITGTTSPQ ALSSQWDIHL HPDDQPRVQQ RWQETVLHGN
AFHEEYRFLR GDGTIRWVIG SAAPQRDPDR VIQGFVGTLT DITERKQMEL ELGKERALLR
SLIDSIPDLI FYKRADGTYM GCNRAFELFC KRPEAALIGH TDQALFSPEL AQLLKSGDEL
VINKNSCFSH EATGLFGDGH QVPFLIQKSP MHGYQGELLG LIGVARDITQ RLRVEQELQQ
AKEDAEAANR SKSEFLAAMS HEIRTPMNVV IGMGEILLET PLNAEQTRYI NSMQHAGDAL
LELIDNILDL SKIEAGRMTL EERAFRLDTM VISITDFFRL QALNHNLSLV VEIAPELEQQ
YVLGDAGRVR QVLYNLLGNA LKFTEEGGVS LHLSLDANQH IHTRVSDTGI GIAPQQLERI
FDNFTQEDSS VTRRFGGTGL GLAICRRFTE LMGGRIWVES IEGQGSTFHM TLPLVLSHTP
LHETPTTAVI TPYNQGIVEA PCAFTPEHPQ RPLSILLVED SEDNRTLFKA FLQHTPHALV
MVENGADALE RVIVERFDLI FMDMQMPIMD GYSATRAIRQ WEQQRGVPPH IIYALTAHAL
SGDRERSLQA GCDDHLTKPI KKRKLLEIIQ QHAQPVE
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