| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2382 |
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| Symbol | |
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| ID | 4481933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3025263 |
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| End bp | 3026387 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723130 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_866288 |
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| Protein GI | 117925671 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0982892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.345648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCAGA CGGGCAGAGG CTTTGACAAG ACAGCTCATG TGTTGAATAA ACGCCTAGAC
CGTCCCTGTA AGGCCAACCA AGCCGGGCGA TCCCTCTCTG CCCAATGGGG CGCAAGTCGC
GTCTTCATTA ACCCTATTTT TGACAGAAAA TACGTGTTAA CGGCCATGTT TATTAACATT
CCAGGATGGC GAATCTCCCG CCCTATGCGC ACCCTACCCG CCATTGTCAT GATGACTCTC
TACGCATTGG CGGGCTTGGC CCACGCCCAG CAACCCCCTT GGCGGGTCGG TTTTTGCCAA
GACACCCTGG ATATTCCCTG GCGTGCAGCC CAGGCTATGA CGTTTAGCCA AACCCTACAA
ACGGACAAAC GGTTTCAGGT TATCCTCTCC GATGCCAAAG GCAATACCAC CCAACAGGCC
ATTGATTTGG AGCATATGGT CGAACGCGGG GTGCATGTGC TGGTAACCAG CCCGCGGGAT
GGTGCTGTGC TTACCCCTGT CATCTCAAAC ATCTATCGCC AAGGGGTGCC CGTGGTCTTA
TTGTCCCGAC GCACCTTGGA TGAAAATTTT ACAACCTTTA TTGCCCCGGA TGATGCAGAA
ATTGGTCGCC AAGCGGCGCG TTATTTATCA AAACGCCTCA ATGAAAAGGG TAAAATTCTT
GTTATTCAAG GCCTCGGTAG CGCTTCCACA ACCCAGCAGC GCACCGTCGG CTTTATACAA
GAGCTCTCTT TACATCCGCA CATGCAGATT GTTGCCCAAC CCTTTGCCAA TTATAAAAAA
GAGATGGCTA TCTTAATTAT GGAGTCTATC CTGGCCCAAA AGCTCCCCTT TGATGCCATT
TATGTCCACT CCGACGCGAT GGCTTTGGGG GCCATTTTGG CTTTAAAACG AGCGGGCATT
GATCCCACAA AGTTACCGAT TGTCAGTATA GATTACACCC GCGCTGGGCG AGAGTCCCTC
CGGAAAGGGG AGATTGATGC GATTTTCACC TATCCAAACG GGGTTAAACA GGGGATAACC
GCGGTTAAAC GCATCCTAGC AGGACAGCCT GTCAACAAAT TTCAAACTGT GCCTTCCACT
CTGGTGACCC AGGAGAATAT CAACACCCTG GAACCGGTCT TTTGA
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| Protein sequence | MAQTGRGFDK TAHVLNKRLD RPCKANQAGR SLSAQWGASR VFINPIFDRK YVLTAMFINI
PGWRISRPMR TLPAIVMMTL YALAGLAHAQ QPPWRVGFCQ DTLDIPWRAA QAMTFSQTLQ
TDKRFQVILS DAKGNTTQQA IDLEHMVERG VHVLVTSPRD GAVLTPVISN IYRQGVPVVL
LSRRTLDENF TTFIAPDDAE IGRQAARYLS KRLNEKGKIL VIQGLGSAST TQQRTVGFIQ
ELSLHPHMQI VAQPFANYKK EMAILIMESI LAQKLPFDAI YVHSDAMALG AILALKRAGI
DPTKLPIVSI DYTRAGRESL RKGEIDAIFT YPNGVKQGIT AVKRILAGQP VNKFQTVPST
LVTQENINTL EPVF
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