| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2378 |
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| Symbol | |
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| ID | 4481929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 3018136 |
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| End bp | 3020052 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639723126 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_866284 |
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| Protein GI | 117925667 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.619157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCA AACCCACGCC GCGTGTCGTT ACCTTTATCG GCATCTTCTT TCCCTTGATG
CTGGCGGTCT CACTGCTCAC CTATTTTCTC TATAAACTGG ACAAGTTAGA CCGTATCGCC
CTCATCGAGA GCCACGCCCG CAACGAGGTT CACGCGCTGC GTAAGCTGGT GATGGCCGAT
CTTAAAGGCA CCTATAGCGA CCTGGATTTT TTGGTTAATT TAGACGCCTT GGGGGATTTT
TTGGATGACC CCAGCGTGGC CAACCGCGCC CGTGTCAACC GCCTCTTCCA AGGCTTTGCC
CAAGCCAAAC AGCTCTACGA CCAAGTGCGT TTTATTGACG ATCAAGGCAT GGAGGTTATC
CGCATCAATT TTCAGGGGGG GCATGCCACT GTGGTCCCCC GGCAAGAGTT GCAGGATAAA
CATAACCGCT ACTATTTCTT TAACAGCCTC GCCATAAACC GTGGTGAGGT CTATTTTTCA
CCCCTGGATC TCAATGTGGA ACATGGCAAG GTCGAAGAGC CCTTTAAACC CATGTTACGC
ATCGGCACCC CATTGTATGA CCGCAAAGGG GTAAAACGGG GGGTGGTGCT GCTCAACTAC
CTTGCCGACA ACCTCTTAAA GCGCTTTTCC GAAACAGGCC AAGGAGTCTA TAGCCGACCG
CTATTGGTCA ACCAAGATGG TTATTGGCTG ATTGCCCCGA CCCCAGAACA GGCATGGGGA
TTTATGTTTC CTGACCGACA CCATCACCAT ATTGGCCAAA CCTTTCCCAT CGCTTGGAGC
AATATGGGCC AAGATGATAG CAACACCATT GTGGGCAGCA ATGGGATGTT TGTGTTTGAT
ACCATCTATC CCCTGGAAAA ACACAAAATC ACTGCGGTTG CCGGTGGCGC AGACCCCCAA
CCGGGCAAGC TGCTTGAGCG CACCTATCAT TGGAAAGTGA TCTCCCATGT TCCCCAGCAG
GAGCTACAGA GCATCTTTGA CCATTTGCGC AACAGCATTT TCACCCTCTA TGGGGTGGTG
GTGTTTGTGA TCACCACGGT GGCCTTGGTT ATGGCGCAAA AACGCTATGC CGACCAGCGT
GCCCGGCTGC ACAGTGACAC TCAATTAATG CAGCTGGATG TGGCCCGCAA AGAGTTGGTG
CAGACCGAAA AAATGGCATC CTTGGGTCGA TTGGTTGGGG GCTTCACCCA CGAAATCAAC
ACCCCCATAG GCATCGCTGT AGGGGCCTCA TCACAGATCC ATAATTTGCT CGACGAGATT
CAGCAAATAT TAGGGCAGGA AGAGGTCCAC GAGCAGGAGC TATTGGATAA ACTCAAAACG
ATGGATGAGG CGACCCTGCT GACAGAGAAA AACCTTGCCC GCGCCGCCAA CATGATCGTG
CGTTTTAAAC GCACCTCAGC CGATCAAGCC TCGCTGGATG TTCGCAGCTT TAATGTCCGT
CAAGCGGTGG ATGATGTGGT GGGCAGCTTG CATAATCATT TTAAAAACAC CCCTGTAGGG
GTGCGCATTC AGTGCCATGA GCAGCTCATA TTCCGGGGGA TTCCTGGTAT TTTAGAGCAG
GTCATCACCA ATCTACTGAT CAACAGCTTG ACCCATGCCT ATGATAATGG CAAACAGTCG
GGGGTGATCC AACTCAATCT TCAGTTGGCC ACCGATGGCA GCTTGGAGAT GCTGTTTGCC
GATGATGGTG CAGGTATTGC CCACGAAACG ATTGGGCGTA TTTTTGAGCC CTTTTATACC
ACCCGCCGTC ACCAGGGGGG TACTGGGTTA GGGCTCTACG TCTGTTATGA TCTGGTGGTC
AACCAATTAG GGGGTGATCT CCACTGTACC TCTGTGTTAG GGGAAGGAAC CCAATTTACC
ATGCGCATGC CCCCCTTGGT CGATCCCATC TCCAGCGCGA GCCAAGAGAG CGCTTGA
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| Protein sequence | MQAKPTPRVV TFIGIFFPLM LAVSLLTYFL YKLDKLDRIA LIESHARNEV HALRKLVMAD
LKGTYSDLDF LVNLDALGDF LDDPSVANRA RVNRLFQGFA QAKQLYDQVR FIDDQGMEVI
RINFQGGHAT VVPRQELQDK HNRYYFFNSL AINRGEVYFS PLDLNVEHGK VEEPFKPMLR
IGTPLYDRKG VKRGVVLLNY LADNLLKRFS ETGQGVYSRP LLVNQDGYWL IAPTPEQAWG
FMFPDRHHHH IGQTFPIAWS NMGQDDSNTI VGSNGMFVFD TIYPLEKHKI TAVAGGADPQ
PGKLLERTYH WKVISHVPQQ ELQSIFDHLR NSIFTLYGVV VFVITTVALV MAQKRYADQR
ARLHSDTQLM QLDVARKELV QTEKMASLGR LVGGFTHEIN TPIGIAVGAS SQIHNLLDEI
QQILGQEEVH EQELLDKLKT MDEATLLTEK NLARAANMIV RFKRTSADQA SLDVRSFNVR
QAVDDVVGSL HNHFKNTPVG VRIQCHEQLI FRGIPGILEQ VITNLLINSL THAYDNGKQS
GVIQLNLQLA TDGSLEMLFA DDGAGIAHET IGRIFEPFYT TRRHQGGTGL GLYVCYDLVV
NQLGGDLHCT SVLGEGTQFT MRMPPLVDPI SSASQESA
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