Gene Mmc1_2363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2363 
Symbol 
ID4481527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2999170 
End bp2999694 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content51% 
IMG OID639723111 
Producthypothetical protein 
Protein accessionYP_866269 
Protein GI117925652 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00329227 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.435541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGCG TAGGAGCGTG GACATTGAAA AAGTTAATTT CACTTATACT GTTTGCGTTG 
AGCATGCTGA TGGTGCCATC GTCACAGGCT TCTTTCATTG GTGAAAGTTT GGACATGGAT
CTCCCTGGGG AGATGGCCAA CGCAGGTAAA GAGGGTAAAG GGCTGGTGGT TATGTTCCAC
TATAGTGGCT GCCCTTTCTG CGACAAAATG CGCCAGCGGG TTTTTCCTGA TCCCGCAGTG
GTGGCCTATT ACAGCCAGCA TTTTGTGCTG TTAGAGACCA ATATTCGGGG GGATCTTGAG
ATGGTTGCCC CCAATGGTGA GGGGATGAGC GAAAAACAGT GGGCCCATAA GATGCGCATC
CGTGCCACAC CTGTCTTTCT GTTTTTTGAT GCCGAGGGCA AAGAACGGCT TAAATTGACC
GGCTATCAGG CCCCCAACGT CTTTATACAA GCAGGTCGGT ATGTGCAAGA AAAAGGGTGG
GAAAAGGGCT CCTTTGTACG CTGGCTGCGC CAGTCGGGGT CATGA
 
Protein sequence
MGGVGAWTLK KLISLILFAL SMLMVPSSQA SFIGESLDMD LPGEMANAGK EGKGLVVMFH 
YSGCPFCDKM RQRVFPDPAV VAYYSQHFVL LETNIRGDLE MVAPNGEGMS EKQWAHKMRI
RATPVFLFFD AEGKERLKLT GYQAPNVFIQ AGRYVQEKGW EKGSFVRWLR QSGS