Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2363 |
Symbol | |
ID | 4481527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2999170 |
End bp | 2999694 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639723111 |
Product | hypothetical protein |
Protein accession | YP_866269 |
Protein GI | 117925652 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2143] Thioredoxin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00329227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.435541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGCG TAGGAGCGTG GACATTGAAA AAGTTAATTT CACTTATACT GTTTGCGTTG AGCATGCTGA TGGTGCCATC GTCACAGGCT TCTTTCATTG GTGAAAGTTT GGACATGGAT CTCCCTGGGG AGATGGCCAA CGCAGGTAAA GAGGGTAAAG GGCTGGTGGT TATGTTCCAC TATAGTGGCT GCCCTTTCTG CGACAAAATG CGCCAGCGGG TTTTTCCTGA TCCCGCAGTG GTGGCCTATT ACAGCCAGCA TTTTGTGCTG TTAGAGACCA ATATTCGGGG GGATCTTGAG ATGGTTGCCC CCAATGGTGA GGGGATGAGC GAAAAACAGT GGGCCCATAA GATGCGCATC CGTGCCACAC CTGTCTTTCT GTTTTTTGAT GCCGAGGGCA AAGAACGGCT TAAATTGACC GGCTATCAGG CCCCCAACGT CTTTATACAA GCAGGTCGGT ATGTGCAAGA AAAAGGGTGG GAAAAGGGCT CCTTTGTACG CTGGCTGCGC CAGTCGGGGT CATGA
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Protein sequence | MGGVGAWTLK KLISLILFAL SMLMVPSSQA SFIGESLDMD LPGEMANAGK EGKGLVVMFH YSGCPFCDKM RQRVFPDPAV VAYYSQHFVL LETNIRGDLE MVAPNGEGMS EKQWAHKMRI RATPVFLFFD AEGKERLKLT GYQAPNVFIQ AGRYVQEKGW EKGSFVRWLR QSGS
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