Gene Mmc1_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2355 
Symbol 
ID4482054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2990808 
End bp2991722 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID639723103 
Productcytochrome c oxidase, cbb3-type, subunit III 
Protein accessionYP_866261 
Protein GI117925644 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID[TIGR00782] cytochrome c oxidase, cbb3-type, subunit III 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.347171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG AGAACAAAAG CGTATCCACC ACCGGGCACC AGTGGGACGA TGAAGAGGGG 
TATCCCCTTC AGGAGCTTAA CAACCCGCTG CCAACTTGGT GGCTCTACAC CTTCTACTTT
ACCATCGCTT TGTCGATTGT ATGGTGGATT CTGTACCCAG CTTGGCCCAT GAGCGAGAGT
GCCACCCGTG GTACCCTCGG TTGGACCATG CACACACAGC TGCGTGAAGA GTTGGCCGCA
GCGAAACAAG GCCGCGCTGT TTATGAAGAA CAGATTGACA GCATGAGCCT GAACGATATT
GTTAAGGATA GCGGTCTGAA AGCTTATGCT GAGTCCGCTG GTAAAGCGAT CTTTGGTGAC
AACTGCCGTC CTTGTCATGG TCAGGCTGGT CAGAACAATA CCCCTGGGTT CCCTGTTCTA
AACGACGACG ACTGGATCTA TGGCGGTAAA TTGGCCAACA TCAGCGAGAC CATTAACAAT
GGTCGCGGTG GTATCATGCC GATTCACTTG GAATCTGCTG GTGGCTCCTT TAGCGAAGCT
CAGGTCAATA GTCTGGTTGA CTATGTTATG AGCCTCTCTG GTATGGATCA TGATGCCGCA
GCAGCTGCTA AGGGTAAAGC TCTGTATAAT GGCGATGCTT CCTGCTACAC CTGTCATGGT
AACGATGCCA AAGGCTCCCT CAAGGGTAAA GCCGATGGTG AAGAGATTGA TGACAGTGTG
GGTGCGCCTA ACCTGACGGA TGCGATCTGG TTGTACGGTT CTTCACGCGA TGTTATCTAC
AAGACCATCG CCTATGGCCG TAATGGTAAG ATGCCCGCAT GGGGTGAAGG TTTCCAAGGG
TTTGGTAAGC AGCTTACCCC CCTGGATATC AAAAAGCTGG CCATTTATGT GCATGGCTTG
GGTGGCGGTC AGTAA
 
Protein sequence
MSEENKSVST TGHQWDDEEG YPLQELNNPL PTWWLYTFYF TIALSIVWWI LYPAWPMSES 
ATRGTLGWTM HTQLREELAA AKQGRAVYEE QIDSMSLNDI VKDSGLKAYA ESAGKAIFGD
NCRPCHGQAG QNNTPGFPVL NDDDWIYGGK LANISETINN GRGGIMPIHL ESAGGSFSEA
QVNSLVDYVM SLSGMDHDAA AAAKGKALYN GDASCYTCHG NDAKGSLKGK ADGEEIDDSV
GAPNLTDAIW LYGSSRDVIY KTIAYGRNGK MPAWGEGFQG FGKQLTPLDI KKLAIYVHGL
GGGQ