| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2354 |
|---|
| Symbol | |
|---|
| ID | 4482053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2990035 |
|---|
| End bp | 2990772 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639723102 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit II |
|---|
| Protein accession | YP_866260 |
|---|
| Protein GI | 117925643 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00967506 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACATG AATCAATTGA GAAAAATATC CCGTTGATGA GCATCTTGGT GGTGATTGTT
ATCTCCATCG GTGCCATCAT TGAGATCTTC CCACTCTTCT GGATCGATAA GACCATTGAA
AAAGTGGAAG GCATTCGTCC CTATACACCA CTGGAACTGC GCGGTCGTGA CATTTATGTT
CGTGAAGGTT GCTACAACTG TCACTCCCAG ATGATTCGTC CTTTCCGTGA CGAGTGGGAG
CGCTATGGTC ATTACTCTTT GGCTGCTGAG TCCAAATATG ACCATCCATT CCAGTGGGCT
TCCAAGCGGA CCGGTCCTGA TCTGGCCCGC GTTGGTGGCA AATATTCCAG CCTCTGGCAC
CAGTCCCACA TGCGTAAACC TCAGTCCGTT GTGCCTGAGT CTGTGATGCC CCACTATCCC
TGGCTTGAGA AATCCAAGCT TGAGTATGGT AACATCACCG GTCGCATGAA TGCTCTGAAC
ACCGCCCATA GCATCGCCTA TGGTGAGACC ATGTACACCG AAGATATGAT CGCCAATGCC
AAAGCAGACC TGGAAGCTCA GGCTACTCCT GACAGTAACA CCGACGGTGT AACAACTCGC
TATGGTAACA AGGTTGCCTT TGATAACTTC GATGGCAAGG CTGGTGAGAT CACCGAACTG
GACGCCCTGG TGGCCTATCT GCAGATGTTG GGAACCCTTG TGGACTTCAC CAACTATAAA
GATCAGGAAC GCTATTAA
|
|---|
| Protein sequence | MKHESIEKNI PLMSILVVIV ISIGAIIEIF PLFWIDKTIE KVEGIRPYTP LELRGRDIYV
REGCYNCHSQ MIRPFRDEWE RYGHYSLAAE SKYDHPFQWA SKRTGPDLAR VGGKYSSLWH
QSHMRKPQSV VPESVMPHYP WLEKSKLEYG NITGRMNALN TAHSIAYGET MYTEDMIANA
KADLEAQATP DSNTDGVTTR YGNKVAFDNF DGKAGEITEL DALVAYLQML GTLVDFTNYK
DQERY
|
|---|
| |