| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2316 |
|---|
| Symbol | |
|---|
| ID | 4480936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2947979 |
|---|
| End bp | 2949040 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639723064 |
|---|
| Product | phosphoribosylformylglycinamidine cyclo-ligase |
|---|
| Protein accession | YP_866222 |
|---|
| Protein GI | 117925605 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.631588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACA ATCAAGACGC CTCCTCACCC AGCGGCATGA CTTACCGTGA TGCAGGGGTT
GATATCGACG CAGGTAACCG TCTGGTCTCT ATGATCAAGC GCTCGGTGGC ATCCACCCAC
CGCCCCGAAG TGCGTAGTGA TCTGGGGGGC TTTGGAGCCC TGTTTGATCT GGACACCCGT
AAATATCAAG ACCCCGTCTT GGTCTCGGCC ACCGATGGCG TAGGCACCAA ATTAAAATTG
GCTTTTCTCA CCGGTAAGCA TGACACCGTG GGCATTGACT TGGTGGCGAT GTCGGTTAAC
GATCTGGTGG TTCAGGGGGC CGAGCCGCTT TTCTTTTTAG ATTATTTTGC CTGTGGCAAG
CTCTCCCCCG AAACCGCCGC CACGGTGGTT GAAGGCATCG CAACGGGCTG TCGCGCGGCG
GGTTGCGCCT TAATTGGGGG CGAAACCGCC GAAATGCCCG GTTTTTATAC CGAGGGTGAA
TATGATCTGG CCGGTTTTGC GGTAGGTGCG GTGGATAAAC ATAAGATTAT TGATGGCCGC
CATATCAGCC CGGGGGATGC CATTATTGGT TTGGCCTCCT CGGGTCCCCA CTCCAACGGT
TACTCCCTGA TTCGTAAATT GGTATTGGGG CAGAGCGGCC CTGGTTTGGA GGCCGACTTT
AATGGCAAAC CCTTGGGTGA AGTGCTGTTA ACCCCTACCC ACATCTATGT ATTGCCCTTG
CTGGAGTTGG CAAAAACCCA CGCCATTCAT GGCTTGGTGC ATATTACCGG CGGCGGCTTT
TGGGAGAATA TCCCCCGCAT TTTGCCCGAC GCTACCGGTG CGCTGCTCAA ACGCAGCTGT
TGGCAGCAGC CCGAGGTATT TAACCTTTTG CAAAAGCTTG GTAACATTGC TGAAGATGAG
ATGTTGCGCA CCTTTAACTG TGGTCTCGGC ATGCTGGTCA TCGTGCCCGC AACCCAGGCC
GACAGCGCCC TGGCCCAGCT ACGCGCCGCC GGGGAGCAAG CCGAACTGGT GGGGGAAATC
ACCTCCTGTA AAGAGGGTGA CGCACGGGTG GTTATCCTAT GA
|
|---|
| Protein sequence | MAHNQDASSP SGMTYRDAGV DIDAGNRLVS MIKRSVASTH RPEVRSDLGG FGALFDLDTR
KYQDPVLVSA TDGVGTKLKL AFLTGKHDTV GIDLVAMSVN DLVVQGAEPL FFLDYFACGK
LSPETAATVV EGIATGCRAA GCALIGGETA EMPGFYTEGE YDLAGFAVGA VDKHKIIDGR
HISPGDAIIG LASSGPHSNG YSLIRKLVLG QSGPGLEADF NGKPLGEVLL TPTHIYVLPL
LELAKTHAIH GLVHITGGGF WENIPRILPD ATGALLKRSC WQQPEVFNLL QKLGNIAEDE
MLRTFNCGLG MLVIVPATQA DSALAQLRAA GEQAELVGEI TSCKEGDARV VIL
|
|---|
| |