| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2296 |
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| Symbol | |
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| ID | 4480916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2927151 |
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| End bp | 2928179 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639723045 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_866203 |
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| Protein GI | 117925586 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.207765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACTGA GTAGTCATCA CCTACTTCTT TTCACGTTTA TCCATGGATT GAATGGCATG
GCACACCCCT TTCGACTTCC CTTGGTTCCG AGCCTGCTGG TGATACTGGC GGCATTGATG
TTGGTACGCA CGGTAGCACC TCGTGACAAG ATCGTTGTGA TTGAGGATAC CAGATCTACT
GCGTTGGCCG CTACGGCGCA GCCACGGCAA GAACGGACTC TCCCGCGCGT TCCCCAACAA
GCCGCAGCCA AGTCGCCCGC GATCTCGACG ACTGTATCTG CCCAAGCCTC TGCCACGCCG
CCTAAACCCA TGGCAGGGGT GGGGGGGGAT GCGGCGGCCA CCAATCTTTG CGACCGTTTG
GCCGCCTCGC CCGATGATCC TCAGCGGGTT AGTCCAGGCG TTATGCTTGA GCCGACCACC
ATAGGGGATG CGGAGTCAGC TTGCCGCGAG ATGGTGGAAA ACGCACCCAA AGAAGGCAGG
TATTTCTACC AGTTGGGGCG CATTTTGGAG GCCAAATCGG CTTGGCGTGG GGCGCGGGAT
GCCCACCAGC AAGCCTCCAA TGTGTGGTAT GCCATGGGTA GTTATCGGTT GGGCATGTTG
CTGTTAAGCG GCAAGGGTGG CGCACAGGAT ATTCATGCTG GTTTGCGGTT GCTGCAAAAG
GCGGCGCTGG CCAAATTGCC GCCTGCCCAA AATGCCATAG GGGTGCATTT GGCCAATGGG
CGGTTGGTCA AACGCAATAT GCGTGAAGCG GTGCGCTGGT TACGCCAAGC GGCCATGGGT
GGTTATGCCC CAGGGATGCA TAATCTATCC CGGGCATTAA TGTCACCCCG CTCTGGAACC
GATGGGCGGC AAGAGGCGTT GGTTTGGCTG CGTAAAGCGG CAGATCGGGG TGTGGCCGAG
GCGCAATATG ATCTAGGCAT GTTGTATGAG CGGGGGAACA TGGTGCCCAA GGATGCCGCA
GAGGCCAAGT TGTGGTTGGG TAAAGCGGCC AAACAGGGGC ATGTGAGGGC GCTCAAACAG
CTTGAGTAA
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| Protein sequence | MVLSSHHLLL FTFIHGLNGM AHPFRLPLVP SLLVILAALM LVRTVAPRDK IVVIEDTRST
ALAATAQPRQ ERTLPRVPQQ AAAKSPAIST TVSAQASATP PKPMAGVGGD AAATNLCDRL
AASPDDPQRV SPGVMLEPTT IGDAESACRE MVENAPKEGR YFYQLGRILE AKSAWRGARD
AHQQASNVWY AMGSYRLGML LLSGKGGAQD IHAGLRLLQK AALAKLPPAQ NAIGVHLANG
RLVKRNMREA VRWLRQAAMG GYAPGMHNLS RALMSPRSGT DGRQEALVWL RKAADRGVAE
AQYDLGMLYE RGNMVPKDAA EAKLWLGKAA KQGHVRALKQ LE
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