Gene Mmc1_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2282 
Symbol 
ID4482650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2913349 
End bp2915406 
Gene Length2058 bp 
Protein Length685 aa 
Translation table11 
GC content52% 
IMG OID639723031 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_866189 
Protein GI117925572 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAC TGGATCCCCA ATTAATGTTA GCCGGAATCA ACGACGGCGC TTTGGGTAGC 
ATTTTTCTGG ATGACCAAGA ACAGATTGTG TTCTGGAATC GCTGGATGGA GCGTGCTTCT
GGTCTAAAAC GAGCAGAGGT TCTGGGGCGT CCATTGCGAG AGGTTTTTCC AGAGCTGGTG
GGTGGTCGCC TTTTGCGTGC TGTCGCTACC GCGTTGGAGA CGGGCCTGCC GGCCTTGTTG
TCACACAAGC TTAATCTTTG GCCCTTACCG CTCTATCCTT CTTATGCGGT GCGTCCACAT
GGACCGCGCC TCTGTCAGCA AATTATGATC AATGCGCTGC GACCCCATGG GGAAAAACGT
TTCGTACTGA TCCAAATCCA AGATATCAGC CACACGGTGC AGCGCGAGCA GCTGCTGCAA
GAACAGACCC GCGTGCTGAT GCAGCGGGAA GAGGAGCTTA CCGCCAGTCG CTTGAAGGCC
GATCAAGCGA ACCAGGCCAA GAGCGAGTTT TTGGCGAATA TGAGCCATGA GATCCGCACC
CCGATGAATG CCATTATCGG TATGGCAGAT CTGCTGCTGG AAACCGAGTT GAATAAGGAT
CAACGGCGTT ATGTGCAAAT TTTCGCCCGG GCGGGGGCGT CGCTGTTAGA GCTTATTAAT
GATGTGTTAG ATCTCTCAAA GGTGGAGGCC GATAGGCTGG AGTTGGAACA TCGACCTTTT
GATCTGTGGG CATTGGTCGA GGGTGCGGTA GAAATTTTTA CCCTGCGTAC CCAAGAAAAA
GGGGTCAAAC TGGATTTTGA GCTCTCGGCA CGCGCACCAC GCTATGTGAT TAGCGACCAG
AAACGGCTTC GGCAGATCTT GGTCAATTTG CTGGGTAATG CGGTAAAATT CACCCAATCG
GGTCAAATTC AACTCTGGGT GGATGTGAGA GATTGTGAAG ATGCAGGCGG TTGGCTCTAT
TTTCGCGTGC AAGATAGTGG CATTGGTATG AGCAAAGCGC AGCAAAAGTC GATTTTTGAG
CCCTTTGTGC AAGCGGATGC CTCTGTTACC CGTCAGCATG GGGGGACAGG CTTAGGTTTG
GCGATTTGTA AAAAGTTGGT GGAGCTATTA TCCGGGGATA TCTGGTTGGA GAGCGAACTC
GGCCAGGGCA GTCGTTTTCA TTTTACCGCA CGTTTTACCC ATACCGCTCT GGTGGCTGAA
AGTGAGCGAG CGTTCACGTC AGCCAAACTG CACGGGCGCC ATGTTTTGCT GTTGGGCAGT
CAACCGCAAA ACCGAGTTTT GCTGGAATCT GTGTTACGCC GTGCCGGCTG CCAGATTACC
ACGGTCACGC ATCAGGCGCA GTTGGCGGGC CATTTGTTGG AGCCGCCAGC GGGATTGCGC
CCTTTTCACG CGGTGCTGGT GGACTGTTAC AATAGCATGG CGCGTGTTCA CCAGCAGATT
GCCTCGGTCC GGGCCAATGG CAGCGTTATG CCCATGGTGC TGTTGGTGGG TGAAGCGCGG
CAAGAGGATA TCCAAATAGC GGCAGATTTA GGGGTATTGC TGCTGGAAAG GCCCGTTTCG
CACGGTCGCC TGCTTGAGGC GCTGGGGGCG ACGATGGAGC AGGGTGAAGC AGCGCTATTA
TCTTCTTCTC TGTCACCGAC AGCCGCCATT GAGATGCTTA AACAGGTGCC GCTTAAAATT
CTGCTCACGG AAGATTCGGT GGACAACGCC GTACTGTTTA AAGCCTATTT AAAACAGTAT
CCCTTAGAAA TTACCCATGC CGCCAATGGG GCTGAAGCAC TCACGCTTTT TGAGCAGCAT
CACTATGATC TGGTCTTTAT GGATTTACAA ATGCCGGTTA TGGATGGCTA CAGTGCAACC
CGTGCCATGC GTTTTTTTGA AAAGCAGCAG CGGCGACCGC CCACCCCTAT CTTGGCCTTA
ACCGCCTATG CATTAAGTGG TGATGCAGAT AAAAGTCGGG ATGTTGGGTG TGATGCCCAT
TTGGTTAAAC CTATTAAAAA ATTGGAATTA TTGTCTTCAA TTGCCCAATA TGGTCTAAAA
ATTTCGCTGG AAAGCTAG
 
Protein sequence
MQELDPQLML AGINDGALGS IFLDDQEQIV FWNRWMERAS GLKRAEVLGR PLREVFPELV 
GGRLLRAVAT ALETGLPALL SHKLNLWPLP LYPSYAVRPH GPRLCQQIMI NALRPHGEKR
FVLIQIQDIS HTVQREQLLQ EQTRVLMQRE EELTASRLKA DQANQAKSEF LANMSHEIRT
PMNAIIGMAD LLLETELNKD QRRYVQIFAR AGASLLELIN DVLDLSKVEA DRLELEHRPF
DLWALVEGAV EIFTLRTQEK GVKLDFELSA RAPRYVISDQ KRLRQILVNL LGNAVKFTQS
GQIQLWVDVR DCEDAGGWLY FRVQDSGIGM SKAQQKSIFE PFVQADASVT RQHGGTGLGL
AICKKLVELL SGDIWLESEL GQGSRFHFTA RFTHTALVAE SERAFTSAKL HGRHVLLLGS
QPQNRVLLES VLRRAGCQIT TVTHQAQLAG HLLEPPAGLR PFHAVLVDCY NSMARVHQQI
ASVRANGSVM PMVLLVGEAR QEDIQIAADL GVLLLERPVS HGRLLEALGA TMEQGEAALL
SSSLSPTAAI EMLKQVPLKI LLTEDSVDNA VLFKAYLKQY PLEITHAANG AEALTLFEQH
HYDLVFMDLQ MPVMDGYSAT RAMRFFEKQQ RRPPTPILAL TAYALSGDAD KSRDVGCDAH
LVKPIKKLEL LSSIAQYGLK ISLES