Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2282 |
Symbol | |
ID | 4482650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2913349 |
End bp | 2915406 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639723031 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_866189 |
Protein GI | 117925572 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAC TGGATCCCCA ATTAATGTTA GCCGGAATCA ACGACGGCGC TTTGGGTAGC ATTTTTCTGG ATGACCAAGA ACAGATTGTG TTCTGGAATC GCTGGATGGA GCGTGCTTCT GGTCTAAAAC GAGCAGAGGT TCTGGGGCGT CCATTGCGAG AGGTTTTTCC AGAGCTGGTG GGTGGTCGCC TTTTGCGTGC TGTCGCTACC GCGTTGGAGA CGGGCCTGCC GGCCTTGTTG TCACACAAGC TTAATCTTTG GCCCTTACCG CTCTATCCTT CTTATGCGGT GCGTCCACAT GGACCGCGCC TCTGTCAGCA AATTATGATC AATGCGCTGC GACCCCATGG GGAAAAACGT TTCGTACTGA TCCAAATCCA AGATATCAGC CACACGGTGC AGCGCGAGCA GCTGCTGCAA GAACAGACCC GCGTGCTGAT GCAGCGGGAA GAGGAGCTTA CCGCCAGTCG CTTGAAGGCC GATCAAGCGA ACCAGGCCAA GAGCGAGTTT TTGGCGAATA TGAGCCATGA GATCCGCACC CCGATGAATG CCATTATCGG TATGGCAGAT CTGCTGCTGG AAACCGAGTT GAATAAGGAT CAACGGCGTT ATGTGCAAAT TTTCGCCCGG GCGGGGGCGT CGCTGTTAGA GCTTATTAAT GATGTGTTAG ATCTCTCAAA GGTGGAGGCC GATAGGCTGG AGTTGGAACA TCGACCTTTT GATCTGTGGG CATTGGTCGA GGGTGCGGTA GAAATTTTTA CCCTGCGTAC CCAAGAAAAA GGGGTCAAAC TGGATTTTGA GCTCTCGGCA CGCGCACCAC GCTATGTGAT TAGCGACCAG AAACGGCTTC GGCAGATCTT GGTCAATTTG CTGGGTAATG CGGTAAAATT CACCCAATCG GGTCAAATTC AACTCTGGGT GGATGTGAGA GATTGTGAAG ATGCAGGCGG TTGGCTCTAT TTTCGCGTGC AAGATAGTGG CATTGGTATG AGCAAAGCGC AGCAAAAGTC GATTTTTGAG CCCTTTGTGC AAGCGGATGC CTCTGTTACC CGTCAGCATG GGGGGACAGG CTTAGGTTTG GCGATTTGTA AAAAGTTGGT GGAGCTATTA TCCGGGGATA TCTGGTTGGA GAGCGAACTC GGCCAGGGCA GTCGTTTTCA TTTTACCGCA CGTTTTACCC ATACCGCTCT GGTGGCTGAA AGTGAGCGAG CGTTCACGTC AGCCAAACTG CACGGGCGCC ATGTTTTGCT GTTGGGCAGT CAACCGCAAA ACCGAGTTTT GCTGGAATCT GTGTTACGCC GTGCCGGCTG CCAGATTACC ACGGTCACGC ATCAGGCGCA GTTGGCGGGC CATTTGTTGG AGCCGCCAGC GGGATTGCGC CCTTTTCACG CGGTGCTGGT GGACTGTTAC AATAGCATGG CGCGTGTTCA CCAGCAGATT GCCTCGGTCC GGGCCAATGG CAGCGTTATG CCCATGGTGC TGTTGGTGGG TGAAGCGCGG CAAGAGGATA TCCAAATAGC GGCAGATTTA GGGGTATTGC TGCTGGAAAG GCCCGTTTCG CACGGTCGCC TGCTTGAGGC GCTGGGGGCG ACGATGGAGC AGGGTGAAGC AGCGCTATTA TCTTCTTCTC TGTCACCGAC AGCCGCCATT GAGATGCTTA AACAGGTGCC GCTTAAAATT CTGCTCACGG AAGATTCGGT GGACAACGCC GTACTGTTTA AAGCCTATTT AAAACAGTAT CCCTTAGAAA TTACCCATGC CGCCAATGGG GCTGAAGCAC TCACGCTTTT TGAGCAGCAT CACTATGATC TGGTCTTTAT GGATTTACAA ATGCCGGTTA TGGATGGCTA CAGTGCAACC CGTGCCATGC GTTTTTTTGA AAAGCAGCAG CGGCGACCGC CCACCCCTAT CTTGGCCTTA ACCGCCTATG CATTAAGTGG TGATGCAGAT AAAAGTCGGG ATGTTGGGTG TGATGCCCAT TTGGTTAAAC CTATTAAAAA ATTGGAATTA TTGTCTTCAA TTGCCCAATA TGGTCTAAAA ATTTCGCTGG AAAGCTAG
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Protein sequence | MQELDPQLML AGINDGALGS IFLDDQEQIV FWNRWMERAS GLKRAEVLGR PLREVFPELV GGRLLRAVAT ALETGLPALL SHKLNLWPLP LYPSYAVRPH GPRLCQQIMI NALRPHGEKR FVLIQIQDIS HTVQREQLLQ EQTRVLMQRE EELTASRLKA DQANQAKSEF LANMSHEIRT PMNAIIGMAD LLLETELNKD QRRYVQIFAR AGASLLELIN DVLDLSKVEA DRLELEHRPF DLWALVEGAV EIFTLRTQEK GVKLDFELSA RAPRYVISDQ KRLRQILVNL LGNAVKFTQS GQIQLWVDVR DCEDAGGWLY FRVQDSGIGM SKAQQKSIFE PFVQADASVT RQHGGTGLGL AICKKLVELL SGDIWLESEL GQGSRFHFTA RFTHTALVAE SERAFTSAKL HGRHVLLLGS QPQNRVLLES VLRRAGCQIT TVTHQAQLAG HLLEPPAGLR PFHAVLVDCY NSMARVHQQI ASVRANGSVM PMVLLVGEAR QEDIQIAADL GVLLLERPVS HGRLLEALGA TMEQGEAALL SSSLSPTAAI EMLKQVPLKI LLTEDSVDNA VLFKAYLKQY PLEITHAANG AEALTLFEQH HYDLVFMDLQ MPVMDGYSAT RAMRFFEKQQ RRPPTPILAL TAYALSGDAD KSRDVGCDAH LVKPIKKLEL LSSIAQYGLK ISLES
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