| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2277 |
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| Symbol | nhaA |
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| ID | 4482645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2908571 |
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| End bp | 2909764 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639723026 |
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| Product | pH-dependent sodium/proton antiporter |
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| Protein accession | YP_866184 |
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| Protein GI | 117925567 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3004] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00329368 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTA AAATTAGAAA AATGCTACAC AATCCGGCGG CAAGTGGAAT TTTGATCTTT
CTTGCGGCTG TTGCAGCGAT GGCTGTAGAA AACAGTGCAT GGAACACTCA CTACAACGCC
TTTCTCGATA TTCCAGTCTC GGTACAGTTT GCCGATTTAA CCATTGCCAA GCCCCTGCTG
CTTTGGATCA ATGATGGTTT AATGGCGGTT TTTTTTCTTT TGGTCGGTTT GGAACTTAAA
CGTGAGTTTC TTGAAGGAGA GCTGTCACAA CCCTCCAACG TCATCTTACC GGTGGTCGGT
GCCGTAGGCG GCATCGCTCT GCCAGCTGCA ATCTACACAT TAATCAATCA AGGCAACCCT
GCGGCGTTGG ATGGCTGGGC CATACCAACA GCCACGGACA TCGCCTTCGC GTTGGGTATC
CTGGCCTTAT TGGGTAAGCG TGTACCTGCA TCTCTGAAAC TGTTCCTGTT AACCTTAGCC
ATTATCGATG ATTTGGCTGC CATCCTAATC ATCGCCTTTT TTTATACCAG CGAGCTCTCC
CCCGCTTCCC TAATGATTGC AGGCAGCGCG ATCGGTACGC TTATCCTTAT GAATCGCCTA
GGTGTTACGG GAATTTCTGG CTACATGGTA GTGGGCATCG TGCTGTGGAT TGCTGTGCTG
AAGTCTGGTG TGCACGCCAC ATTGGCCGGG GTTGTGCTGG GTTTTGTCAT TCCGCTTAAG
GGGGAAGAAC CAGGGGAGCT TTCCCCCCTG CATCAACTGG AAGACGATCT TCACCACGTG
GTAGGGTTGG GTATTCTGCC CCTGTTTGCT TTTGCCAATG CGGGGGTTTC TCTGCAAGGG
CTTACGCCCT CCATCCTGCT GGACCCTGTT CCCCTGGGCA TTGCACTGGG CCTGTTCTTA
GGCAAACAAA TCGGCGTGTT CGGTTTTGTT TGGCTGAGCA TTAAGAGTGG TTTGGCCAAA
TTACCAGAGG GTTTCACCTG GAAGCAACTC TATGGTGTCG CGCTACTGTG TGGGGTTGGT
TTTACCATGA GTCTATTTAT CAGTTCCTTG GCTTTTGAAC ATGGTAGCTC CGCCCTCGTG
TCGGGCGCTC CCGATATGGG AAGCGCTCGT TTGGGCATTC TCACTGGCTC TATCCTTTCC
GGCATTTTCG GATACATCCT CTTGCGTTTT TCCTTACCAA AACCTCCGCA ATAG
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| Protein sequence | MNAKIRKMLH NPAASGILIF LAAVAAMAVE NSAWNTHYNA FLDIPVSVQF ADLTIAKPLL
LWINDGLMAV FFLLVGLELK REFLEGELSQ PSNVILPVVG AVGGIALPAA IYTLINQGNP
AALDGWAIPT ATDIAFALGI LALLGKRVPA SLKLFLLTLA IIDDLAAILI IAFFYTSELS
PASLMIAGSA IGTLILMNRL GVTGISGYMV VGIVLWIAVL KSGVHATLAG VVLGFVIPLK
GEEPGELSPL HQLEDDLHHV VGLGILPLFA FANAGVSLQG LTPSILLDPV PLGIALGLFL
GKQIGVFGFV WLSIKSGLAK LPEGFTWKQL YGVALLCGVG FTMSLFISSL AFEHGSSALV
SGAPDMGSAR LGILTGSILS GIFGYILLRF SLPKPPQ
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