Gene Mmc1_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2269 
Symbol 
ID4482637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2902079 
End bp2903362 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content50% 
IMG OID639723018 
Productmajor facilitator transporter 
Protein accessionYP_866176 
Protein GI117925559 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000581212 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCCA CCCCCATTAT TCTGGAGCGG CACCACAATA CGCTCTACCT TATTGTCGCG 
CTCACCATGG TTTTTATGAC GCTGGTGCTG GCCACTCAGC CACTCTATTT GCGGAATGTA
CTGCAAATTG GTCGGGAAAA TGCGGGGTTT GTCAATGCCA ATATCCAAGT CATAACAGAG
GTTCTGGATT TGGTCTTGGT TGGTTATTTG GGCTATCTTT CGGACCGGTT TGGTCGCATT
CCCATCATTT TTTGGGGGTT TGTCGCCGCA GGTGTCACCG CGCTTTTGGC CCCTATGAGT
GGGTGGTTGG GCGTTATTTT AGGTATAGAT GCCTTGGCCA TCTACTACCT TGCCCGCATT
CTCATGTCAC TGGGCACGGC CGCTGTCTGG CCGCAGCTTT CGACCTTGAC GGGCGATTAT
ACCACCAAGG AGAGCAGGCC GGTTTTGTTG TCCAAAGTGG CTTTTATGAT GGCTTTTGGT
GCGACATTGG TTTATGCCGT GCTTATGCAA TTGCCGAACT ATGTGGGCGT TGAATGGGTG
ATGGTACTAC CGGCTGTTGT TGCCTTGCTC AGTGCTTGGC TGGTGCGACA CTTTTTGTTG
GAGACATCCA CCAAGCTGGA GTCCAGCACC TTTCCCCTGC GTCGGGTTGT CTATCTGGTG
CGCAAACGCA GTGCGTTACA GTTAAGTTTT TTGGCCGCGT TCACGTCACG CAATGATATG
GTCTTGATTG GTCTGTTTCT CATGACCTGG TTTATCTATT TTGGCGATCT GGTGCCGGGG
GTAGATCATA ATCAAGCAGC GGCTAGAGCC GGTTTTGTTA TTGGTTTTAT CGGCGTGACG
ATCTTATTGA GTATTCCCTT TTGGGGATGG TTTATCCGCT ATTATGGCCG GGTAGAGGCG
GTTGTTCTGG GATTGTTGCT CAGTGGCGTG GGGTTTCTTG GTTTTGGATT GATCATCAAT
CCTATGACCT GGTGGTCACT CTTACCTGCG CTGTTTGTGG GGTTGGGGCA GGCGGGCTGT
CTGGTCGCGC CACAGATTTT GGCCCTGGAT AATGCTGAAC CAGAGATTCG TGGTTCTATC
ATGGGGGCCT TTAATACGGC GGGGTGTATT GGCATCATTG TTTTTTTGCA GATTGGCGGT
TTTTTGTTTG ACTATATCAG TCCAACGGCC CCCTTGCTGT TTACTGGTTT TGCCAATCTA
CTGATCATGT TTTACGGCTT GGCTGTCAAA CGCTGGGGCG AACAGCCCTT TGAAGAAGAA
CCCATTGTTG ATTATGAACC GTGA
 
Protein sequence
MRPTPIILER HHNTLYLIVA LTMVFMTLVL ATQPLYLRNV LQIGRENAGF VNANIQVITE 
VLDLVLVGYL GYLSDRFGRI PIIFWGFVAA GVTALLAPMS GWLGVILGID ALAIYYLARI
LMSLGTAAVW PQLSTLTGDY TTKESRPVLL SKVAFMMAFG ATLVYAVLMQ LPNYVGVEWV
MVLPAVVALL SAWLVRHFLL ETSTKLESST FPLRRVVYLV RKRSALQLSF LAAFTSRNDM
VLIGLFLMTW FIYFGDLVPG VDHNQAAARA GFVIGFIGVT ILLSIPFWGW FIRYYGRVEA
VVLGLLLSGV GFLGFGLIIN PMTWWSLLPA LFVGLGQAGC LVAPQILALD NAEPEIRGSI
MGAFNTAGCI GIIVFLQIGG FLFDYISPTA PLLFTGFANL LIMFYGLAVK RWGEQPFEEE
PIVDYEP