Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2269 |
Symbol | |
ID | 4482637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2902079 |
End bp | 2903362 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639723018 |
Product | major facilitator transporter |
Protein accession | YP_866176 |
Protein GI | 117925559 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000581212 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCCA CCCCCATTAT TCTGGAGCGG CACCACAATA CGCTCTACCT TATTGTCGCG CTCACCATGG TTTTTATGAC GCTGGTGCTG GCCACTCAGC CACTCTATTT GCGGAATGTA CTGCAAATTG GTCGGGAAAA TGCGGGGTTT GTCAATGCCA ATATCCAAGT CATAACAGAG GTTCTGGATT TGGTCTTGGT TGGTTATTTG GGCTATCTTT CGGACCGGTT TGGTCGCATT CCCATCATTT TTTGGGGGTT TGTCGCCGCA GGTGTCACCG CGCTTTTGGC CCCTATGAGT GGGTGGTTGG GCGTTATTTT AGGTATAGAT GCCTTGGCCA TCTACTACCT TGCCCGCATT CTCATGTCAC TGGGCACGGC CGCTGTCTGG CCGCAGCTTT CGACCTTGAC GGGCGATTAT ACCACCAAGG AGAGCAGGCC GGTTTTGTTG TCCAAAGTGG CTTTTATGAT GGCTTTTGGT GCGACATTGG TTTATGCCGT GCTTATGCAA TTGCCGAACT ATGTGGGCGT TGAATGGGTG ATGGTACTAC CGGCTGTTGT TGCCTTGCTC AGTGCTTGGC TGGTGCGACA CTTTTTGTTG GAGACATCCA CCAAGCTGGA GTCCAGCACC TTTCCCCTGC GTCGGGTTGT CTATCTGGTG CGCAAACGCA GTGCGTTACA GTTAAGTTTT TTGGCCGCGT TCACGTCACG CAATGATATG GTCTTGATTG GTCTGTTTCT CATGACCTGG TTTATCTATT TTGGCGATCT GGTGCCGGGG GTAGATCATA ATCAAGCAGC GGCTAGAGCC GGTTTTGTTA TTGGTTTTAT CGGCGTGACG ATCTTATTGA GTATTCCCTT TTGGGGATGG TTTATCCGCT ATTATGGCCG GGTAGAGGCG GTTGTTCTGG GATTGTTGCT CAGTGGCGTG GGGTTTCTTG GTTTTGGATT GATCATCAAT CCTATGACCT GGTGGTCACT CTTACCTGCG CTGTTTGTGG GGTTGGGGCA GGCGGGCTGT CTGGTCGCGC CACAGATTTT GGCCCTGGAT AATGCTGAAC CAGAGATTCG TGGTTCTATC ATGGGGGCCT TTAATACGGC GGGGTGTATT GGCATCATTG TTTTTTTGCA GATTGGCGGT TTTTTGTTTG ACTATATCAG TCCAACGGCC CCCTTGCTGT TTACTGGTTT TGCCAATCTA CTGATCATGT TTTACGGCTT GGCTGTCAAA CGCTGGGGCG AACAGCCCTT TGAAGAAGAA CCCATTGTTG ATTATGAACC GTGA
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Protein sequence | MRPTPIILER HHNTLYLIVA LTMVFMTLVL ATQPLYLRNV LQIGRENAGF VNANIQVITE VLDLVLVGYL GYLSDRFGRI PIIFWGFVAA GVTALLAPMS GWLGVILGID ALAIYYLARI LMSLGTAAVW PQLSTLTGDY TTKESRPVLL SKVAFMMAFG ATLVYAVLMQ LPNYVGVEWV MVLPAVVALL SAWLVRHFLL ETSTKLESST FPLRRVVYLV RKRSALQLSF LAAFTSRNDM VLIGLFLMTW FIYFGDLVPG VDHNQAAARA GFVIGFIGVT ILLSIPFWGW FIRYYGRVEA VVLGLLLSGV GFLGFGLIIN PMTWWSLLPA LFVGLGQAGC LVAPQILALD NAEPEIRGSI MGAFNTAGCI GIIVFLQIGG FLFDYISPTA PLLFTGFANL LIMFYGLAVK RWGEQPFEEE PIVDYEP
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