| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2244 |
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| Symbol | |
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| ID | 4480586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2862683 |
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| End bp | 2866933 |
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| Gene Length | 4251 bp |
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| Protein Length | 1416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639722993 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_866151 |
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| Protein GI | 117925534 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.35167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAA AAAAATTGAC CATTCTGGGT CAATATGGTC AGTTGGTCGT CTTACTCTTT
GAAGGTGTAA ACGAGGTTGA TGAACCCGTA CGGCTGCTCT CGCCAACCAG TGGCTATGAA
CGGCTGAATG ATCAAGATAG CGCTACGTTC TTTCATGATG TTGCCCCACA ACTCATGAAT
GATTTAACCG ATACCATCCA TGCGCTCCGG CGTCACCTGT TAAAAGAGTG GTCACATAAC
CACGAGGATC CTCGTCAAGC TGGTCCGATC TCTGCCGCAT ATTTCAACTT TCAAAATGCG
GTGCGTCAAA ATGAAGAAGC GTCTCTCTCT GAAAATCCAT TTTACGATCT TGCCAAGCTG
ATTTATCGTC TGCACCAACA GGCGTTGCAG AGTAATTTTC AGAATAGTTT AAAACAGATT
GGTGAAACGC CAGATTTTAA TATGCCGGTG GTGCGCCCCT TTAAACAGAT TTGGGGAAAA
GCGTATCGCT CGGACCCCCT GTGGCGCAAG CTGTGGCACA CCATCAGCTT GGTGGTTATT
TCTAGTAAAA CCATGTTGGC GTTGTTTCTT TTTGTTTTCT CAACTTTTAC AACCTCCCGT
GGTGTCAATG AGCTGCTGCA AACACCTATG GTCGAAGCGT TGTTTGGCTC CTTATTTCTG
GGTCAAGATG GGGAACTGCC CCGGGCTCTA ATCGCGTGGG GCAGTGGTGT GGTGCTCTCA
TCCGCGATCT TAGATTATAA AAACAGAATT TTTATAGGGA TTGTTGAGCG CGGGAAAATA
TTTAAAGGAA TTTTTTTGTC GATGCAACGC AACCCACGTT GGTTTGTGTT GGCTTTTTTC
TTAACCTTTG TCTCTATTTT TACCAACTAT GACGGTATTG TAACCCTGCT TTCCAAACAT
GGGGATCTGG CTAAGCAGGC TGAGGAGATT CAACACCGCG TGGAGATGGT GTTAGGTCAA
CGAGCCTTGG CTAACCCCGA CAACCCTCAA TCGCTGAACG GCTTGCTACG CTCCTTGGAA
AATACCGCAG AGGCGGCCAT TCAAACTTTT CGGCAGATCC CCGAGGATGA AATTTCCGGT
GTGGCATCCA GCCGTGACCC CCGTAAAGGC CCACGCTATT GGGCCAAGCA CTTTATTATT
TTTGGGGGAT ATTACGAAGG GGTTAATGAT ATTCCGACGG TTTTTCGTAA CTCCACGGCG
GCGCAGCAGG TTAACCGTAT TCTACTGGAT TCGGGTCTGG ATTTAACCCA GTCGGTGGAG
CAGCGGATCA AGGATCTGCT GGCGCTCTAC CGGGACCATT TTAACCATAC TGAACGAAAA
GTCCTGGAAA AACTGAATGC CCTCAATGGG TTGATGACCA TTAAAGATTT CACGCCGACA
GAGTTGCAGC GCATTTTGAC GTTGGAACAC TATAAGGTCA ACCAGCGTAT CGCGGAAATC
ATCAAACTGG TTGAGGAAAA TAAGACCGTT TATGACGAGG TAGCCTCGGA TCTTAATCTG
CTCATGGGTG AGCGGGTTGC CCTGCTGCAA TTGGTCGATA AATATGGCAA ATCGGTTAAT
GCCAGCTACA ATGTCGCGGT CAATGTGGAT GTCCCGGAAA TTTCCTCTAT CGAGGCGTTA
AAGTCCGGTA TTATTCCGGT TGCCACACAT AAAAGTCTGG CGGAGCTTAA AGGATTTTTG
GTCGAAAAAT ATGGTCTGGC CATGGGGGGG TTGATCCTGA CGGCCATCCT CTATTTTGCC
ATAAGTATTG ATTTGGCAGA CGTTATGTTC TTTATGCACC ATAGCGCCGC AGTGGGTCGT
AGAGATCAAA AAAAGTTAAA ACAGAAAATA GATCAACTGG ATAAATGGGA AAAAAATCTG
ACCCATGGCT TGTTAAATTT TTTTCAGCAG GGGCAGGTTA CAGCCATTCT CAACTGGTTG
CCAACAGCTT CTAGTGTCAT TATACGCTAT GGTTTGTTTA GACAAGCCAA TGAGTTGAAG
CTTATCCTGC GTGAACCTTC GGATCGACAC CCTCTGGCGG CCCTGAGTAT CTGGTTTATT
GGCCTATTTC ACATGGCCAG GCATCCTCAT GTTAATTTGA TCAATGCATG GTACGATTTT
GCCCTGCATA TTCGTTCTGG CCAGGAGCGC ATGGCCAATC GACTGTTTTG GTCCTTTTAT
CCTGGGGTGC AATTGGGCGC TGGTGTGCCT AAGCAGGGAT TTGACTACCT GGAAAAGCAG
TCGCTGAAGG GCATTGAAAA AAACAAAGTA GATTTTGCTC AGGAGGTTAA ATCGGTTGTC
AAGCAGGTTG AAGACCCGTG TGGCGAGGTC AAATGGAGTG TGCTGTTCCG GCAAGAAGAT
GGCGACTTTA AGCGCTTGGA AAATGCCTTA CAAAAGCTGC AAAAATCAGG AAAAACCGAC
GATGAAAGCC ATCATTCTGG CCTGTTTGGG CGCCAGGGCA GTGCCCTGTG GAAGTTGTTC
TCTTTTATCG CGTTTAGGGG CTACTGTTTG TGGCGGACGC TGATTTTAAG CGACTTTGCC
CCGGCTGTAG AGCCGTTCCC TGTCGAATAT AAACAGTGGC TGCGGGATCT GGAGCGAAAT
TTAGAAGATT CGCGCCGGAT TAGCGAGGTG GTCAGTTACA AAGTGCCTTT GGCCAAACGG
ATCATGCAGG AATTGCCCGT GTTTCAAGCG ATGGTCTTGC TGCCTGTGCG GTCCAAAATA
GATTCGTGTG ATGATGATTG GGCGCTGCCC TACCGAGCGT TGATTAACTA TTTTATCCCG
ATATTTCATG ATCTAGAAGC CGAAGCCATG CAGTTGCTTG GCTTCTATAA ACGCACCCAA
GAAAAACTGT CGCTGGACGA TCCATGGATG ACCAAATCGG ATGGTGGTTA TGTTCAGTTG
ATGTATAACA TGAGCGGCGA AAATTTTTCG AATGTTGAAA AGTATGATTT TTTGCGTGAA
CAACTCAAAG AAGCTCAAGA GACCATTGCC CTTATCTTCG AACGGATCGA ACTGCAAAAA
CAGTTAATTC AAGAAACCCG GGAATGCGAA CAGCGTTTTT CACATTTGAC CATGCGTGTG
CGCATGCGCA GTTATGGTCA GATGGGTGGT CAGATGGGGG GACACCAACA AGCCGCTCAG
TTGATTGATC GAATTAAACA TGAGATGCAG TTGATGCTCG ATTCTGCCGA GGAGTTGGTG
ATTCCTGGTG CGGTTCCTGA TGAGTTGACA TTGGAAACCT TAAAGCAAAT TCGAGATCGT
ATGCATGAAG TGGAGACCCG TATTGATGGA GGTGACGGCC TCTTTGTGGA TGAGATGCTC
AGCCCGACCT ATGTGCCAAG TGACTTATTC CCCGATGAGG TTGTGGAGGA TAAGCTTTCT
TCTCACGACA TGCCAACCTA TGAAACCATG GTTAGCACCA CACAGGCGGC TGGCATAACC
TCACCTGTGC GTAGTCGGCC CTCTGCGGGA AGAACGCAGG GGGGGGCAAC TCAAGTAGCG
AAAGCTGTGC CCCAACTGTC CAAGCAGACG ATGAATTTTA AGAGTGAGCC AACCATTGTG
GAAGAGGAAG TGTGGGTCCC GCCCGTACCA CGCGCGGAGC CCCCTAAAGA GAGACGACAG
GAGCGCAGCA CGCTTGAAAC GCCGTTGTCG TCTCAAGAGG GGCCACCCGT GCGCCGTTCG
AACCAAGTGA CACATTCATG GCCTAAACTC AAAACCACCT TTAAGAGCCC TGTTTTGGAT
CTGGAGCGTT TGGTGGTTTC GCACCAAGCA AGCGCAGCAA GACCCTTGGC ACAGGCCCCC
TTGGCACAGG CCCCCTTGGC ACAGGCCCCC TTGGCACAGG CCCCCTTGGC ACAGGCCCCC
TTGGCACAGG CCCCCTTGGC ACAGCCTAAT AAGGGGTCCA CTGCCATGCA AACACCTGAT
TTAGCGCAAA TACGGCGGAA GGAAAATCCA CGACGTCAAA ATAAACGGGT GGAACATGCT
TCTACAGTGG AGTTTATCAA TGAGAGCGGT TGGATCTATA GGGGATTGAC CGAGGATATT
AGCGTGACCG GTGTGCGTGT GGTGATACGG GGTTCGCTGC ATGGATTGTA TCCTGGCGAA
AGCGGTGCCT TTTTCCTGAT GGGGCACGCG GATGAACGCG GCTTCCCCTG CAAAATCGTG
CGGGTGGAAG AGGATACACT GGTTTTAAAA ATCACCGGCG ACCTGTCGCG TTATAGCTTA
TTGGTGATGC AAGACGCCTT TGCCCAGTTT AATTTTTTGA ATGCGCCGTA G
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| Protein sequence | MQQKKLTILG QYGQLVVLLF EGVNEVDEPV RLLSPTSGYE RLNDQDSATF FHDVAPQLMN
DLTDTIHALR RHLLKEWSHN HEDPRQAGPI SAAYFNFQNA VRQNEEASLS ENPFYDLAKL
IYRLHQQALQ SNFQNSLKQI GETPDFNMPV VRPFKQIWGK AYRSDPLWRK LWHTISLVVI
SSKTMLALFL FVFSTFTTSR GVNELLQTPM VEALFGSLFL GQDGELPRAL IAWGSGVVLS
SAILDYKNRI FIGIVERGKI FKGIFLSMQR NPRWFVLAFF LTFVSIFTNY DGIVTLLSKH
GDLAKQAEEI QHRVEMVLGQ RALANPDNPQ SLNGLLRSLE NTAEAAIQTF RQIPEDEISG
VASSRDPRKG PRYWAKHFII FGGYYEGVND IPTVFRNSTA AQQVNRILLD SGLDLTQSVE
QRIKDLLALY RDHFNHTERK VLEKLNALNG LMTIKDFTPT ELQRILTLEH YKVNQRIAEI
IKLVEENKTV YDEVASDLNL LMGERVALLQ LVDKYGKSVN ASYNVAVNVD VPEISSIEAL
KSGIIPVATH KSLAELKGFL VEKYGLAMGG LILTAILYFA ISIDLADVMF FMHHSAAVGR
RDQKKLKQKI DQLDKWEKNL THGLLNFFQQ GQVTAILNWL PTASSVIIRY GLFRQANELK
LILREPSDRH PLAALSIWFI GLFHMARHPH VNLINAWYDF ALHIRSGQER MANRLFWSFY
PGVQLGAGVP KQGFDYLEKQ SLKGIEKNKV DFAQEVKSVV KQVEDPCGEV KWSVLFRQED
GDFKRLENAL QKLQKSGKTD DESHHSGLFG RQGSALWKLF SFIAFRGYCL WRTLILSDFA
PAVEPFPVEY KQWLRDLERN LEDSRRISEV VSYKVPLAKR IMQELPVFQA MVLLPVRSKI
DSCDDDWALP YRALINYFIP IFHDLEAEAM QLLGFYKRTQ EKLSLDDPWM TKSDGGYVQL
MYNMSGENFS NVEKYDFLRE QLKEAQETIA LIFERIELQK QLIQETRECE QRFSHLTMRV
RMRSYGQMGG QMGGHQQAAQ LIDRIKHEMQ LMLDSAEELV IPGAVPDELT LETLKQIRDR
MHEVETRIDG GDGLFVDEML SPTYVPSDLF PDEVVEDKLS SHDMPTYETM VSTTQAAGIT
SPVRSRPSAG RTQGGATQVA KAVPQLSKQT MNFKSEPTIV EEEVWVPPVP RAEPPKERRQ
ERSTLETPLS SQEGPPVRRS NQVTHSWPKL KTTFKSPVLD LERLVVSHQA SAARPLAQAP
LAQAPLAQAP LAQAPLAQAP LAQAPLAQPN KGSTAMQTPD LAQIRRKENP RRQNKRVEHA
STVEFINESG WIYRGLTEDI SVTGVRVVIR GSLHGLYPGE SGAFFLMGHA DERGFPCKIV
RVEEDTLVLK ITGDLSRYSL LVMQDAFAQF NFLNAP
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