| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2229 |
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| Symbol | |
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| ID | 4481995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2844890 |
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| End bp | 2848039 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639722978 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_866136 |
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| Protein GI | 117925519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.664054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.108682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGAC GATCCTCACT CAAAGTCAAA TTGAGTCTGT TCCTCTTTAT GGTCATCGCT
ATGACAGCGG TGATTGTCAG TTTTTCCGTG CAGCAGTTGG CCATCCAGCA GTTTAAGGCA
AACCGTGATC AGCGTATTCA TGAAACCCAG CAGCAGCTAC TCAACCGTTT TCGCTCCTTT
GATCTGTTTA TGAACGAGTT AGAGGCAGAG CTGGATCTGC GCATGGCGGA GGTCTTGCCC
AAAATTGCTC AACGCATTGC CCAAGGGCCA GAACCCAATG CGTGGAGCCT AAGCCAGCTG
ACCGCCCTGG CGCGGGAGTT TTCCGTTGGG GATATTTATC TGATTGATCA TGATCTCAAG
GTTTTCAATA CCACCTTTAA GCCAGATATG GGCTTAAACC TGGGTCAGCT TGGTGAGAGC
TTGAAAACCA AGCTGGAGGG GCTGCAAGGC AGTGGCCGTC TGGATGTAGA TCGAATTTCC
ATGTCCAACC AGACCGGCAT TATTAAAAAA TATGCTTACC ACGGACCCGT GGGTAAACCC
TATTTAGTTG AGGTGTCGAT CAATATGTGG GAGGGGGCAG AGACCTTTGG CTCCATGGCC
CAGAAGCGTT TTTTTCTTGA GGAGTTTTTC CAAAGTTTGG TCGACAGTAA CGACATTCTT
AAAGAGCTGG ATCTCTTTAT CGCCGATGAT CTGGCCCAGT GGTCGGTACT GCATGAAGGC
ACGCCTATGG ATCCCCAGGC AGCCGCTCAG CTAAAAGGGC AAAACAGCCT GGAACAACTC
AACAACAACC TGTTGACGAT TTACACCATT CAGGCTAGGC GAGAAAATAT CAGTGGATTC
CGATTTTACA GTAAAACCGT CTTTGATACC GCCATGCCCG CCGATTTTTA TCGTGGGGTG
CATCTAAGCA CCCTCGGCTT GGCTCTGGTC GTGGCGCTAC TGGCCTATTT ATTGGTGGAT
CGGTTGATCT TTCGCCAGCT TTATGCCCGT GTGCAGAGTA TGGATCAAGG CCTCAAACAG
ATGCGCGAAG GGGCACTGAA CACCCGCATC CCTGTTATAG GCGATGATGA GCTAACCCGC
ATTACCTTGG CCATCAACGA GCTGGCCATG CAGGTGCATG ATCGAGAACA GCAGCTAACA
GCGACCAAAG AGGATCTGGA AAAACGGGTG GCGGCCCGTA CCCTGGATCT GCAAACCTCC
ATGCGAGCGC TCTCGGAGCG GGAAGCCAAC TACCGCTATT TGGTAGAACA TGCTCGCAGC
ATTATTCTCC GCTGGAAGCC TGACGGGGTG ATCACCTTTT GCAACGACTA TGCGCTCTCT
TTTTTTGGTT ATAGCGAGCA GGCGCTGCTG GGAAGTTCGG TCTATGAGAC CATCGTCCCT
AACCGTGAGA GCAGTGGTCG TAACTTGCAC CAGAGGGTGG ATGAGGTGGC GAATACCCCA
AACAGTTTTA CCTTTCACGA AAATGAGAAT ATCTGTAAGG ATGGCCGCCG GGTGTGGGTC
GCTTGGGCCA ACCGGGCCAT CCTTGATGAG CAGGGCCAGC TTAAAGAGCT GTTGAGTGTA
GGTGCCGACA TTACCCATCT GAAGATGATC CAGCAGGAGC TGACCCTCGC GAGGGATGCC
GCCAATGCCG CCAACCGTGC CAAAAGTGCG TTTTTAGCGG TGATGAGCCA TGAAATACGT
ACCCCAATGA ATTCCATTTT GGGCATGACC GATCTGCTCA TGGAGCACGC TCTGGATGCC
GAACAGCGCC ACGCCCTACA GGCTATTGCA CGGGCTGGCG ACGCGCTGAT GATTATCATT
AATGACATCC TGGATCTCAG TAAGATTGAA GCCGACCGCC TGGAGCTGGA GTTGGTGGAG
ACCGATCTAG ACAATCTTAT GGCAAATTTG GGGGATATGC TCACCCTGCG TGCCCAGGAG
AAGGGTGTGA AACTGAGTTT GTTAAGAGAA GAGCAACTAT CCCCCTATCG CTGGTGCGAT
CAGGTGCGGC TGCGGCAAAT TTTGGTTAAT CTCATAGGGA ATGCCATCAA GTTTACCCAC
CAGGGTAGCA TCGAGGTTAA GCTCAGCAAG GGGCCGGGCA ATCGCATTCG TTTTAGTGTC
TCCGACAGCG GCATTGGGAT TGACCTACAG CAACAGGAGG CCATTTTTGA ATCCTTTAAC
CAAGGGGATT CCAGTGTCAC CCGACGCTAT GGTGGTACTG GGCTAGGGCT CTCCATCAGT
CAGCGTCTGG TTAAGCTGAT GGGGGGTGTT CTCAAGGTGT ACAGTCGGCC CGGTAAGGGT
AGCACCTTCT TTTTTACCAT TCCCATGGCG CCCGTACCCC ATCTCGGTCG ACATCTGACG
CATATACAGA ATTGGGAACA ATTTCACCTG CTGCTGGTAG AACCTGTTGG CACAACAAGC
ACAATTGGAC AACTGTTAAC CCCGTTGGGT ATGCAGGTCA GCCATCTTCA CGAACTTACC
CATATCAGCC AAGTCGTGGC TCAATTGGAT CCCATTGATC TGCTATTGAT TAATCTGGAT
AGCGTAGAGG ATGAAACCCT AAATCAGAGT CTGCAACAGG TGCATGATCA CCCGGCTAGC
GCCCGGCTGC CGTTACTGTT ACTGCTGCCA GAACCGGATC ATACCCGTTT TGAGATGGTT
AAAGGGATAG GGGGACACTG TTTGGCTAAA CCAGTACGCA GACAAGGGTT GATTGATGCC
ATGGAGCTGG TTATCGGGGC CAAACATGCT ACGCAAGAAG CGAAGATTGC AGGTGAAATT
AAGGGCTTAA AAATTCTTAT CGCTGAAGAT TCTGACGATA ATATTTTATT GCTGCAATCC
TACCTAAAGG GGTCTGATCA TCAATTGACC ATTGTGCGCA ACGGCCTAGA GGCGCTGCAA
CAGGTGGAAC AACACCATTT TGACTTGGTG TTGATGGATG TACAGATGCC GGTGATGGAC
GGGCTTGAAG CCACCCGCAA GATTCGCCTC ATGGAACAGC AACAGGGGGC ACGGCAGCCG
CTACCTATTG TTACCTTAAC CGCCCATGCT ATGCTGGAAG ATAAACGGCG CAGTGTGGAG
GCCGGCTGCA CCGACCACCT GACAAAACCC ATCAAAAAAC AGGTTCTACT CAAGGCGATT
GCAAAATTGA TGCAATCGGT TGCAGCATAA
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| Protein sequence | MHRRSSLKVK LSLFLFMVIA MTAVIVSFSV QQLAIQQFKA NRDQRIHETQ QQLLNRFRSF
DLFMNELEAE LDLRMAEVLP KIAQRIAQGP EPNAWSLSQL TALAREFSVG DIYLIDHDLK
VFNTTFKPDM GLNLGQLGES LKTKLEGLQG SGRLDVDRIS MSNQTGIIKK YAYHGPVGKP
YLVEVSINMW EGAETFGSMA QKRFFLEEFF QSLVDSNDIL KELDLFIADD LAQWSVLHEG
TPMDPQAAAQ LKGQNSLEQL NNNLLTIYTI QARRENISGF RFYSKTVFDT AMPADFYRGV
HLSTLGLALV VALLAYLLVD RLIFRQLYAR VQSMDQGLKQ MREGALNTRI PVIGDDELTR
ITLAINELAM QVHDREQQLT ATKEDLEKRV AARTLDLQTS MRALSEREAN YRYLVEHARS
IILRWKPDGV ITFCNDYALS FFGYSEQALL GSSVYETIVP NRESSGRNLH QRVDEVANTP
NSFTFHENEN ICKDGRRVWV AWANRAILDE QGQLKELLSV GADITHLKMI QQELTLARDA
ANAANRAKSA FLAVMSHEIR TPMNSILGMT DLLMEHALDA EQRHALQAIA RAGDALMIII
NDILDLSKIE ADRLELELVE TDLDNLMANL GDMLTLRAQE KGVKLSLLRE EQLSPYRWCD
QVRLRQILVN LIGNAIKFTH QGSIEVKLSK GPGNRIRFSV SDSGIGIDLQ QQEAIFESFN
QGDSSVTRRY GGTGLGLSIS QRLVKLMGGV LKVYSRPGKG STFFFTIPMA PVPHLGRHLT
HIQNWEQFHL LLVEPVGTTS TIGQLLTPLG MQVSHLHELT HISQVVAQLD PIDLLLINLD
SVEDETLNQS LQQVHDHPAS ARLPLLLLLP EPDHTRFEMV KGIGGHCLAK PVRRQGLIDA
MELVIGAKHA TQEAKIAGEI KGLKILIAED SDDNILLLQS YLKGSDHQLT IVRNGLEALQ
QVEQHHFDLV LMDVQMPVMD GLEATRKIRL MEQQQGARQP LPIVTLTAHA MLEDKRRSVE
AGCTDHLTKP IKKQVLLKAI AKLMQSVAA
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