Gene Mmc1_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2228 
Symbol 
ID4481994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2843719 
End bp2844291 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content49% 
IMG OID639722977 
ProductTetR family transcriptional regulator 
Protein accessionYP_866135 
Protein GI117925518 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCTA AACATAAGCG CATCATTGAG GCTGCTATTG CGCTGTTTGC CCAACGTGGA 
TTGGACAACA TATCAACCGC TCAAATTGCC CGTGCGGCCG ATGTAAGCCT ACCGATCCTG
CTCCAAGAAT TTGATAGCAA AGAGCCGCTG TTGCAGGAAA TTTTGCATCA ACTCAAGCGC
GAAACCATCC GTGTTGCCCA CAATGATCTT CGTATAGACA TGGGGTTACG GGAGCATCTT
AGCCTAGTTT GGCACAATTT AATTGAGTGG GCCTTAGAAC ATCCAGAACG TTACCAACTG
CTGCTTACGC TATGTACATC CAACCAAGCA CAGACCCTGC TCGGCTTATC CCATGACGAT
TTTAGCCACC TTTTCCCAAA AGAGCCGATG CTCGACGCCA TTGAGCATGG CACCATTGCT
ACGCTACCCA GCCTTTACCA TCAACACCTC TTCCGTTTAC TCCTTGATGG CACGGTACAG
TATATTTTAC GCACCAAACC CGATGACAAA CAGTGTAGAC TCTACATAGA TCAAACGTTT
GCCCTCTACT GGCGGGCCAT ACACAACCGG TAG
 
Protein sequence
MEPKHKRIIE AAIALFAQRG LDNISTAQIA RAADVSLPIL LQEFDSKEPL LQEILHQLKR 
ETIRVAHNDL RIDMGLREHL SLVWHNLIEW ALEHPERYQL LLTLCTSNQA QTLLGLSHDD
FSHLFPKEPM LDAIEHGTIA TLPSLYHQHL FRLLLDGTVQ YILRTKPDDK QCRLYIDQTF
ALYWRAIHNR