| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2205 |
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| Symbol | |
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| ID | 4482272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2812335 |
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| End bp | 2814131 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722950 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_866112 |
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| Protein GI | 117925495 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.204646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.261416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTC GCGATGTGCT CTCGCCCTTT ACTGCGTGGA AAAATCTGTT TCGTGAACCG
GTATCCATTA AGGATCCCAT TCACCGCAAA GCTGCACCGC GCTACCGTGG TTTCCACAAA
AATGATGTGG AAAAATGTAT TGGCTGTGGA ACCTGTGAGG CGATTTGTCA AAACGGTGCC
ATTGATATGG TGGAGAACCG GGATGTACCC GGTAACCGCA GTGATTCTGG CTTGCGTCCC
CGTATTGATT ACGGGCGCTG CTGCTGGTGT GCGCTGTGTG TTGACGTCTG CATGACCAGT
TCTCTTACCA TGTCCAATGC CTATCAGTGG GTAGACAGTG ACCCTAAGGC CTTTATGTTT
ACGCCTGGGG TGGACCCCAA ATATTGGGAC AATATGGAGC AGGGCTACCG CCGTCCCGAG
GGGCACCGTT TAACCCCTGC GGCACGGGTG CATATGCACG AGATGGAGGC TGAGGAGCGT
TTAGACTCCT TTACCGAAAT TGTGGATGGC TACTCGGTAA CCGATGCCCA GTTTGAGGCT
GACCGCTGTG TGGCGTGTGG CTTATGTGTG GCGACCTGCC CAGCTCATAT GAGTATTCCC
GACTATATTG CGGCGGTGCG TGATGGGGAT TATGAGCGGG GCTTGGCCCT GCTTTATGAA
ACCAACCCCT TCTCCAATGT CTGTGGGCGG GTCTGTACGC ACAAGTGCGA AACCGTGTGT
GCGGTCAACC ATGAGGGTGA GCCCATTGCC ATCCGTTGGT TAAAACGTCA CATTGCCGAT
CAGGTGCCGG TGGAGAAATA TCGCCAGATT ATTGGGGATC CTGCGCCGGC TGTGGGTAAA
AAAGTTGCGG TGGTGGGGGC GGGACCGGCC GGTTTAACGG CGGCTTTTGA TCTGGCAAAA
ATGGGCTATC AGGTCGAAGT TTACGAGGCC CGTCCCAAAC CCGGTGGTAT GTTCCGCTAT
GGTATTCCCG AATACCGTCT GCCCTATGAT ATGATGGACC GGGATATTGA TGTTATTACC
TCAATGGGGG TCAATATTCA CTGCAACATG CGGGTAGGCC ATGATATTGC CATGGAGCAG
CTCCGTGAGG GACATGATGC GGTGTTGTTG ACCATTGGTT TGCACTTGGG TCGTTCCACC
CGTATTCCGG GCTCCGACCA TCCCAACGTG ACCAAGGCCA TTGACTTGCT ACGGCAGATA
ACCGAAGGGC AACAGATCGA GGTGCCCCGC CAGTTGGTTG TGATTGGCGG TGGAAACGTG
GCCATGGATA TTGCCCGTAG TGTGGCCCGT TTGCAAAAAC AGAGCTATGG TGAGATCAAA
GTCACCCTCA CGGCGTTGGA GGATCGCGCC CATTTCCTGG CGGACCCGGA TGAGATCCGT
GAAAGTCTTG AAGAGGGGAT TGAAATTTTG GATGCCCGTG GTCCACAAGA GATCCTGGTG
GATGACAACG GTGCGCTGGT TGGGCTGAGA ACATTGCGGG TGCTGGCTAT TTTTGATAGT
GAGGGGCGCT TTGCCCCCAG CTATGATGAG AGCGATGAGC GCATTCATCC TGCCAATATG
ATCAGTGAGG CCATTGGCCA AATGTCTGAC ACGGAACTGC TGGGTGAACC GCTTAAAGAG
GCCTTAGAGT GGAACCGTGG TCGTATTGCG GTCGATGGCA TGGGACGCAC TTCAGAGCCG
TGGCTGTGGG CGGCTGGGGA TTGTGTCAAG GGTCCCGATG TGATCCATGC GGTGGCAGAT
GGGCACCGGG CTGCCGAGAG CATTGATGCC GCCATCAAAG GGCAGGGAGG TGCATGA
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| Protein sequence | MTIRDVLSPF TAWKNLFREP VSIKDPIHRK AAPRYRGFHK NDVEKCIGCG TCEAICQNGA
IDMVENRDVP GNRSDSGLRP RIDYGRCCWC ALCVDVCMTS SLTMSNAYQW VDSDPKAFMF
TPGVDPKYWD NMEQGYRRPE GHRLTPAARV HMHEMEAEER LDSFTEIVDG YSVTDAQFEA
DRCVACGLCV ATCPAHMSIP DYIAAVRDGD YERGLALLYE TNPFSNVCGR VCTHKCETVC
AVNHEGEPIA IRWLKRHIAD QVPVEKYRQI IGDPAPAVGK KVAVVGAGPA GLTAAFDLAK
MGYQVEVYEA RPKPGGMFRY GIPEYRLPYD MMDRDIDVIT SMGVNIHCNM RVGHDIAMEQ
LREGHDAVLL TIGLHLGRST RIPGSDHPNV TKAIDLLRQI TEGQQIEVPR QLVVIGGGNV
AMDIARSVAR LQKQSYGEIK VTLTALEDRA HFLADPDEIR ESLEEGIEIL DARGPQEILV
DDNGALVGLR TLRVLAIFDS EGRFAPSYDE SDERIHPANM ISEAIGQMSD TELLGEPLKE
ALEWNRGRIA VDGMGRTSEP WLWAAGDCVK GPDVIHAVAD GHRAAESIDA AIKGQGGA
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