Gene Mmc1_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2205 
Symbol 
ID4482272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2812335 
End bp2814131 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content55% 
IMG OID639722950 
Productputative oxidoreductase 
Protein accessionYP_866112 
Protein GI117925495 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.204646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.261416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTC GCGATGTGCT CTCGCCCTTT ACTGCGTGGA AAAATCTGTT TCGTGAACCG 
GTATCCATTA AGGATCCCAT TCACCGCAAA GCTGCACCGC GCTACCGTGG TTTCCACAAA
AATGATGTGG AAAAATGTAT TGGCTGTGGA ACCTGTGAGG CGATTTGTCA AAACGGTGCC
ATTGATATGG TGGAGAACCG GGATGTACCC GGTAACCGCA GTGATTCTGG CTTGCGTCCC
CGTATTGATT ACGGGCGCTG CTGCTGGTGT GCGCTGTGTG TTGACGTCTG CATGACCAGT
TCTCTTACCA TGTCCAATGC CTATCAGTGG GTAGACAGTG ACCCTAAGGC CTTTATGTTT
ACGCCTGGGG TGGACCCCAA ATATTGGGAC AATATGGAGC AGGGCTACCG CCGTCCCGAG
GGGCACCGTT TAACCCCTGC GGCACGGGTG CATATGCACG AGATGGAGGC TGAGGAGCGT
TTAGACTCCT TTACCGAAAT TGTGGATGGC TACTCGGTAA CCGATGCCCA GTTTGAGGCT
GACCGCTGTG TGGCGTGTGG CTTATGTGTG GCGACCTGCC CAGCTCATAT GAGTATTCCC
GACTATATTG CGGCGGTGCG TGATGGGGAT TATGAGCGGG GCTTGGCCCT GCTTTATGAA
ACCAACCCCT TCTCCAATGT CTGTGGGCGG GTCTGTACGC ACAAGTGCGA AACCGTGTGT
GCGGTCAACC ATGAGGGTGA GCCCATTGCC ATCCGTTGGT TAAAACGTCA CATTGCCGAT
CAGGTGCCGG TGGAGAAATA TCGCCAGATT ATTGGGGATC CTGCGCCGGC TGTGGGTAAA
AAAGTTGCGG TGGTGGGGGC GGGACCGGCC GGTTTAACGG CGGCTTTTGA TCTGGCAAAA
ATGGGCTATC AGGTCGAAGT TTACGAGGCC CGTCCCAAAC CCGGTGGTAT GTTCCGCTAT
GGTATTCCCG AATACCGTCT GCCCTATGAT ATGATGGACC GGGATATTGA TGTTATTACC
TCAATGGGGG TCAATATTCA CTGCAACATG CGGGTAGGCC ATGATATTGC CATGGAGCAG
CTCCGTGAGG GACATGATGC GGTGTTGTTG ACCATTGGTT TGCACTTGGG TCGTTCCACC
CGTATTCCGG GCTCCGACCA TCCCAACGTG ACCAAGGCCA TTGACTTGCT ACGGCAGATA
ACCGAAGGGC AACAGATCGA GGTGCCCCGC CAGTTGGTTG TGATTGGCGG TGGAAACGTG
GCCATGGATA TTGCCCGTAG TGTGGCCCGT TTGCAAAAAC AGAGCTATGG TGAGATCAAA
GTCACCCTCA CGGCGTTGGA GGATCGCGCC CATTTCCTGG CGGACCCGGA TGAGATCCGT
GAAAGTCTTG AAGAGGGGAT TGAAATTTTG GATGCCCGTG GTCCACAAGA GATCCTGGTG
GATGACAACG GTGCGCTGGT TGGGCTGAGA ACATTGCGGG TGCTGGCTAT TTTTGATAGT
GAGGGGCGCT TTGCCCCCAG CTATGATGAG AGCGATGAGC GCATTCATCC TGCCAATATG
ATCAGTGAGG CCATTGGCCA AATGTCTGAC ACGGAACTGC TGGGTGAACC GCTTAAAGAG
GCCTTAGAGT GGAACCGTGG TCGTATTGCG GTCGATGGCA TGGGACGCAC TTCAGAGCCG
TGGCTGTGGG CGGCTGGGGA TTGTGTCAAG GGTCCCGATG TGATCCATGC GGTGGCAGAT
GGGCACCGGG CTGCCGAGAG CATTGATGCC GCCATCAAAG GGCAGGGAGG TGCATGA
 
Protein sequence
MTIRDVLSPF TAWKNLFREP VSIKDPIHRK AAPRYRGFHK NDVEKCIGCG TCEAICQNGA 
IDMVENRDVP GNRSDSGLRP RIDYGRCCWC ALCVDVCMTS SLTMSNAYQW VDSDPKAFMF
TPGVDPKYWD NMEQGYRRPE GHRLTPAARV HMHEMEAEER LDSFTEIVDG YSVTDAQFEA
DRCVACGLCV ATCPAHMSIP DYIAAVRDGD YERGLALLYE TNPFSNVCGR VCTHKCETVC
AVNHEGEPIA IRWLKRHIAD QVPVEKYRQI IGDPAPAVGK KVAVVGAGPA GLTAAFDLAK
MGYQVEVYEA RPKPGGMFRY GIPEYRLPYD MMDRDIDVIT SMGVNIHCNM RVGHDIAMEQ
LREGHDAVLL TIGLHLGRST RIPGSDHPNV TKAIDLLRQI TEGQQIEVPR QLVVIGGGNV
AMDIARSVAR LQKQSYGEIK VTLTALEDRA HFLADPDEIR ESLEEGIEIL DARGPQEILV
DDNGALVGLR TLRVLAIFDS EGRFAPSYDE SDERIHPANM ISEAIGQMSD TELLGEPLKE
ALEWNRGRIA VDGMGRTSEP WLWAAGDCVK GPDVIHAVAD GHRAAESIDA AIKGQGGA