| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2197 |
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| Symbol | secA |
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| ID | 4483938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2799526 |
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| End bp | 2801475 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639722942 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_866104 |
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| Protein GI | 117925487 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0987454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGGGG TTTCTGAGCT GCTGCTGCCC AGCCCGGTGC CCCAGGGTGT CGAGGGGGTG
CTGCATGGGT TGCATGGGCG CTGGCGTGGC CGTGCCGCCC ATCGGCGGCG GTTGATGCAG
CTGGCCGAGC AGGCTGAGCG CCGCTGTATG GCCCTGCTGG GCTTGCCGGA AACCCAGCTG
CAACAGCAGC TGCTGGAGAT TCAATCACGG TTTCGGCGAC GTCTGCTTAC CGATGATGAA
ACCCTGTTGG CGGGGGTGGC TTTGGTGGGC GAATTGGCTT GGCGGGCGGT GCAAAAACGT
CCCTATCGGG TGCAGTTTAT GGGGGCGTTG GCCATGCATC GGGGCTGGTT GGCGGAGATG
GCCACGGGTG AGGGTAAAAC CCTTACGGTG GCGGTGGCGG CGGTGCTGGC GGGTTGGAGT
GGGCGGGCCT GCCATGTGAT TAGCGCCAAC GATTATCTAA CCGAGCGGGA CGCGCAACAG
ATGACCCCCC TGTATGAGGC GTGTGGGGTG ACGGTCGCCA GCGGTGGCGG GGCATTGAGC
CCCGAGGAAC GGCAGCTCTG TTACAAGGCC GATGTGGTCT ATGTGACGGC CAAAACCTTG
TTGGCGGACT ATCTGCGGGA CCAGTTGGCA ACGCGGCAAG GGGCGGGGCG GGCGCAACAA
GGCTTTGCTC AGTGGCTCAC GGGGGGGGCG CAGCAGCCCA GCGCGATGAT GCTTGGGCGC
GGCTTACACA CGGTGATTAT TGACGAAGCC GACAGTGTGT TGATTGATGA GGCGGTGACG
CCGTTGATTT TGGCGGCGCC ACAGAAAATA CCGGGCATGC ATGGGGCGGT GATGTGGGCG
GCTGAGGTGG CGGAACGCCT GCACGAGGAA GAGGACTACA CCGCAGACCG ACGCACCCGG
CAGATTCAAC TGCTGGAGGG GGCCAATCAG TTGATGGCCG CCATGGCGTG GCGGTTGGAT
GCGGTGTGGC GCAGTGAGGT GCGGCGGCAG GAGCTGGTTC GCCATGCCTT GAGCGTGCGT
CACTTTATCC GGGTGGGGCA GCACTATCTG GTGCAGGAAG ATAAGGTGGT ATTGCTGGAT
GATGCCACCG GACGCATGAC CCCAGAGCGC AGTCTGACGG CGGGTTTGCA TCAAGCCATT
GAGGCTTATG AAGGGGTGCC CTTGACCGAT CCCAATGCGT CCATGGGGCA GATGAGTTTT
CAAACCTTTT TTCGGCGTTT TCATCGGTTT TGTGGCACCA CCGGCACCGC GCGGGAGTCC
ACCCGCGAGT TGTGGCGCAT CTATCGGCTG GCAGTTTTGC CAATCCCCAC CCACCGGCCC
CGGCAGACGG TGGTGCATCC TACCCGCGTT TACGCCACGT TGGAGGATAA GTGGCAGGCG
GTGGCCGCCG AGGTTGCCCA GGTGCACGCC AGTGGACGGC CCGTTTTGGT GGGGGTGCGC
TCGGTTTCGT CCAGTGAGCA GTTGGCGGCG GTGCTGGTGG AAAAGGGGCT GTCGGCCCAG
GTGTTAAATG CCCGTAATCA TGCCGAAGAG GCTGCAATTG TCAGCCGCGC GGGGCAGTCG
GGGCATGTGA CCATCGCCAC CAACATGGCG GGTCGGGGCA CCGATATTGG GTTGGAGGAG
CAGACCCGTA GCTTGGGGGG GTTGCATGTG ATTATTGCCG AGTGCAACAG CTCGGCGCGC
ATTGATCGCC AGTTGGCGGG CCGCTGCGGG CGACAGGGTG ACCCGGGCAG TGTGGTCACT
TTGCTCTGTT TGGAAGAAGA TGTGTTGCGG CAGCAGCTCT CCCCTGCGCT GTTGGGGATT
GCTCGCAGCT TGCCACGTTG GGGGTGGGCC GCAGGGGTGT TGGCTGGCTT GGTACACTAT
GCCCAGCGCC GTTCAGAAGC TCAAGCCTAT GGGCAACGGC GGGCGGTGAT GCAAGGGGAT
GAGTGGCTCA ATAATGCGCT CCCTTTTTAA
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| Protein sequence | MSGVSELLLP SPVPQGVEGV LHGLHGRWRG RAAHRRRLMQ LAEQAERRCM ALLGLPETQL
QQQLLEIQSR FRRRLLTDDE TLLAGVALVG ELAWRAVQKR PYRVQFMGAL AMHRGWLAEM
ATGEGKTLTV AVAAVLAGWS GRACHVISAN DYLTERDAQQ MTPLYEACGV TVASGGGALS
PEERQLCYKA DVVYVTAKTL LADYLRDQLA TRQGAGRAQQ GFAQWLTGGA QQPSAMMLGR
GLHTVIIDEA DSVLIDEAVT PLILAAPQKI PGMHGAVMWA AEVAERLHEE EDYTADRRTR
QIQLLEGANQ LMAAMAWRLD AVWRSEVRRQ ELVRHALSVR HFIRVGQHYL VQEDKVVLLD
DATGRMTPER SLTAGLHQAI EAYEGVPLTD PNASMGQMSF QTFFRRFHRF CGTTGTARES
TRELWRIYRL AVLPIPTHRP RQTVVHPTRV YATLEDKWQA VAAEVAQVHA SGRPVLVGVR
SVSSSEQLAA VLVEKGLSAQ VLNARNHAEE AAIVSRAGQS GHVTIATNMA GRGTDIGLEE
QTRSLGGLHV IIAECNSSAR IDRQLAGRCG RQGDPGSVVT LLCLEEDVLR QQLSPALLGI
ARSLPRWGWA AGVLAGLVHY AQRRSEAQAY GQRRAVMQGD EWLNNALPF
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