Gene Mmc1_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2182 
Symbol 
ID4483016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2736875 
End bp2737186 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content47% 
IMG OID639722927 
Producthypothetical protein 
Protein accessionYP_866089 
Protein GI117925472 
COG category[S] Function unknown 
COG ID[COG0011] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00106] uncharacterized protein, MTH1187 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000001374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT TGGTGGAATT TTCCATGACC CCATTAGATA AAGGCGAGAG TGTAAGCACC 
TATGTGGCAC GCTCTCTGGA GATCATTAGC AACAGCGGCC TGCCCTACAA GCTTGGCCCT
ATGGGTACTT GCATTGAAGG AGAGTGGGAC GAGGTTATGG CCGTGATCAA ACAATGCTAT
GAAAAAATGA ATAGCGATTG TAACCGCATC TCTATTTCAA TAAAAGCGGA TGTTCGCAGC
GGCAAAACAG GCCGGTTAGA GGGCAAAATT CAGTCCGTAG AGGCCAAACT TGGCCGTACA
GTCAATCACT AG
 
Protein sequence
MSVLVEFSMT PLDKGESVST YVARSLEIIS NSGLPYKLGP MGTCIEGEWD EVMAVIKQCY 
EKMNSDCNRI SISIKADVRS GKTGRLEGKI QSVEAKLGRT VNH