| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2181 |
|---|
| Symbol | |
|---|
| ID | 4483014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2735211 |
|---|
| End bp | 2735933 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639722925 |
|---|
| Product | SapC family protein |
|---|
| Protein accession | YP_866088 |
|---|
| Protein GI | 117925471 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000117047 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG CGCTTTATGC TAATGTCGCT GTGGTGAATA GCAAAGAACA TAAAGATCTG
AAGATCAAGC CCATCAACCA TTTCCGTTAT GCAGCCAAGA TTCAGAGTTG CCCTATTTCT
GATATCGAAT TTTTTCCCTG TTCCCTCTCC CATCCCATTA TGTTCGCCAA GGCGGAGGAT
GGTAAAATTG TCCCCTTAGC GCTCATGGGT CTGGAGCGTG AAACCAATCA ATTTGTTTCA
TCGGAAGGGG TTTGGAAAGA GGGCGAATAC ATGCCTGCTT TCTTGCGTCG TTACCCCTTT
ATCATGGTTC GCGATCCTGA AAATACCCGC ATGGTTGTTG GCTTGGATAT GGATGCCGAA
GGGGTTAACC GTGACGAGGG GCGTGAGCTT TTTGATGAAA AAAGCGAAGC CAGCGAGTTT
GCCAAAAGCG CCATGAAATT CCTTACCGAT TTTCAAGAAG CCTTTGACCG CACCCAAAAT
TTCTTGGCCA AAATGTCCGA GCTAGAGTTG TTTGACGATG CCGTGTTTAA CTGGGAGTTT
AAAGGGGTTA CCAGCTCCTT TGGTGGTTTT ATGCGCATTG ATGAAAAGAA ACTTGATGAG
TTGGATGATG AAACCCTGCT CGCCCTGACC CGCAGTGGTC ACTATAAACT GATTGTGGCG
CATTTGGTCT CCCTGCGTCG GTTCCAGCGT TTGGTTGACT GGAAAATGCG TCCAGCCAGC
TAA
|
|---|
| Protein sequence | MAQALYANVA VVNSKEHKDL KIKPINHFRY AAKIQSCPIS DIEFFPCSLS HPIMFAKAED
GKIVPLALMG LERETNQFVS SEGVWKEGEY MPAFLRRYPF IMVRDPENTR MVVGLDMDAE
GVNRDEGREL FDEKSEASEF AKSAMKFLTD FQEAFDRTQN FLAKMSELEL FDDAVFNWEF
KGVTSSFGGF MRIDEKKLDE LDDETLLALT RSGHYKLIVA HLVSLRRFQR LVDWKMRPAS
|
|---|
| |