Gene Mmc1_2174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2174 
Symbol 
ID4483007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2679989 
End bp2680774 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content54% 
IMG OID639722918 
Producthypothetical protein 
Protein accessionYP_866081 
Protein GI117925464 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0043286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.543418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGTC TGGTGACGCT GGGATGTGTG GGTTTAGGGC TGTGGCTGGG CAGCGTGTCG 
GTGCATGCGC AGACGGCCGA TGGCTTGATG CAGCAGATGG AGCAAAATCA AGCACAGATG
CCCCCTGCAA CAGCGGAGGA TGAGGCCATC TCATGCCTGA TTGAACCTTC GATGCAGGCT
TCGCTTGGTA CTCAAGTCGA GGGGGTTTTG GAGCAGGTGC TGGTGGACCG GGGGGATAGC
ATTCGTCAGG GGCAGTTGTT GGCGCGGCTC AATGTTGGGG TGGAAAAGGC GGCGGTGGCT
TACCAGGAGG TTAAGGTCGC GTATGGCAGT CGCCGGGTTG AGCGCAATAA GATGCTCAAG
CAGCAAAAAT TGATTTCACC ACAGGATTTG GATGAAATTG TGACAGAGCG GGATCTCAGC
GAACTGGAGC TGCTTGAGCG TAAGGAGCAG CTTAAATTAC GCCATATTTA TGCCCCGTTT
GATGGGGTGG TGATGGACCG CATGCGTGAT CCGGGGGATA TGATCAAACA AGAGCTGATT
ATGAAGGTGG CGCGTATTGA TCCCCTTTAT GTGGAGTTGG TGGTGCCCGC GACCCAGTTA
AAAGCTTTTC ATAAAGGTGA ACCGCGCTGG ATCGAAATAC CGTTGCTGGG GCAGTCGTTT
CAGGCCCATG TTTCAGTCAT TGATCAAGTG GTGGATGCCG CCAGTGGCAC CTTTAGGGTC
AGAATGGTGC TGCCAAATAA TAAGCGTAGA CTGGCGGCGG GGCTAAGATG TAAACTAAAG
CGCTGA
 
Protein sequence
MVRLVTLGCV GLGLWLGSVS VHAQTADGLM QQMEQNQAQM PPATAEDEAI SCLIEPSMQA 
SLGTQVEGVL EQVLVDRGDS IRQGQLLARL NVGVEKAAVA YQEVKVAYGS RRVERNKMLK
QQKLISPQDL DEIVTERDLS ELELLERKEQ LKLRHIYAPF DGVVMDRMRD PGDMIKQELI
MKVARIDPLY VELVVPATQL KAFHKGEPRW IEIPLLGQSF QAHVSVIDQV VDAASGTFRV
RMVLPNNKRR LAAGLRCKLK R