Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2174 |
Symbol | |
ID | 4483007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2679989 |
End bp | 2680774 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722918 |
Product | hypothetical protein |
Protein accession | YP_866081 |
Protein GI | 117925464 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0043286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.543418 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCGTC TGGTGACGCT GGGATGTGTG GGTTTAGGGC TGTGGCTGGG CAGCGTGTCG GTGCATGCGC AGACGGCCGA TGGCTTGATG CAGCAGATGG AGCAAAATCA AGCACAGATG CCCCCTGCAA CAGCGGAGGA TGAGGCCATC TCATGCCTGA TTGAACCTTC GATGCAGGCT TCGCTTGGTA CTCAAGTCGA GGGGGTTTTG GAGCAGGTGC TGGTGGACCG GGGGGATAGC ATTCGTCAGG GGCAGTTGTT GGCGCGGCTC AATGTTGGGG TGGAAAAGGC GGCGGTGGCT TACCAGGAGG TTAAGGTCGC GTATGGCAGT CGCCGGGTTG AGCGCAATAA GATGCTCAAG CAGCAAAAAT TGATTTCACC ACAGGATTTG GATGAAATTG TGACAGAGCG GGATCTCAGC GAACTGGAGC TGCTTGAGCG TAAGGAGCAG CTTAAATTAC GCCATATTTA TGCCCCGTTT GATGGGGTGG TGATGGACCG CATGCGTGAT CCGGGGGATA TGATCAAACA AGAGCTGATT ATGAAGGTGG CGCGTATTGA TCCCCTTTAT GTGGAGTTGG TGGTGCCCGC GACCCAGTTA AAAGCTTTTC ATAAAGGTGA ACCGCGCTGG ATCGAAATAC CGTTGCTGGG GCAGTCGTTT CAGGCCCATG TTTCAGTCAT TGATCAAGTG GTGGATGCCG CCAGTGGCAC CTTTAGGGTC AGAATGGTGC TGCCAAATAA TAAGCGTAGA CTGGCGGCGG GGCTAAGATG TAAACTAAAG CGCTGA
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Protein sequence | MVRLVTLGCV GLGLWLGSVS VHAQTADGLM QQMEQNQAQM PPATAEDEAI SCLIEPSMQA SLGTQVEGVL EQVLVDRGDS IRQGQLLARL NVGVEKAAVA YQEVKVAYGS RRVERNKMLK QQKLISPQDL DEIVTERDLS ELELLERKEQ LKLRHIYAPF DGVVMDRMRD PGDMIKQELI MKVARIDPLY VELVVPATQL KAFHKGEPRW IEIPLLGQSF QAHVSVIDQV VDAASGTFRV RMVLPNNKRR LAAGLRCKLK R
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