| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2166 |
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| Symbol | |
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| ID | 4483977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2663664 |
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| End bp | 2664656 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722910 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_866073 |
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| Protein GI | 117925456 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.591198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCG TGATGGTCAC TGGTGGAGCC GGTTATGTCG GCTCTATTCT GCTACGGCGC
TTACTGGAGC GAAACTACCG TGTGGTGTGC GTAGATAACC TCATGTTTGG GGGCGAGGCA
CTGCTGGATA TTTGGGAACA CCCCCATTTT AGCTTGGCTA AAAGGGATAT TCGTGATCGC
GAAGCCATGC AAGCGCTGTT TGCCCAAACC CAATTCCATG GGGTGATCCA CCTCGCCGCC
ATTGTGGGAG ACCCCGCCTG TGCCCGCCAG TCAGAACTGG CCCAGCAGAC CAATTGGCAA
GCCTCCATTG ATCTGTTAGA AGCGAGCAAG CAGCATGGGG TAGAACGCTT CATCTTTGCC
TCGACCTGTA GCAATTACGG GAAAATGGCC GACCCTGGCG GCTTTGTCAC CGAAACCTCT
ACCCTCGCGC CGGTTTCCCT CTATGCGGAA CTTAAAGTAA AATTTGAAAA AACTTTGTTG
GAGAGCGATC CCAGCCCAGA TTTTTGCCCC ACCGCCCTAC GCTTTGCTAC CGTTTACGGC
ATCTCACACC GTATGCGCTT TGACCTAACC GTTAATGAAT TCACCAAAGA GTTGGCCCTG
GATAAAGAGC TGGTGGTGTT TGGTGAGCAG TTTTGGCGCC CCTACTGCCA CGTGGCCGAT
TTTTCCCGGG CTATGCTGGC GGTACTTGAG GCCCCCCGCG AAAAGGTCGC CTACGATGTC
TTTAATGTCG GGGATACCGC CGAAAACTAT ACCAAAGGCA TGATCCTAAA CGAGCTTTTA
AAGGTTTACC CCAACGCCCG CATCAAACGC ATAGAGAAAA AAGAAGATCC ACGGGATTAT
CGGGTCAACT TTAGCAAAAT TGCCCAGCGC CTGGATTTTA AAATCTCCAA AACCGTACCC
ATGGGGATGC AGGAGATTGC CGAAATTCTG CAATTGGGGG TCATCCCTAA CCCTGAAGAG
CAAAAATTCT ACAATATTCC CCACACCCCT TAA
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| Protein sequence | MKTVMVTGGA GYVGSILLRR LLERNYRVVC VDNLMFGGEA LLDIWEHPHF SLAKRDIRDR
EAMQALFAQT QFHGVIHLAA IVGDPACARQ SELAQQTNWQ ASIDLLEASK QHGVERFIFA
STCSNYGKMA DPGGFVTETS TLAPVSLYAE LKVKFEKTLL ESDPSPDFCP TALRFATVYG
ISHRMRFDLT VNEFTKELAL DKELVVFGEQ FWRPYCHVAD FSRAMLAVLE APREKVAYDV
FNVGDTAENY TKGMILNELL KVYPNARIKR IEKKEDPRDY RVNFSKIAQR LDFKISKTVP
MGMQEIAEIL QLGVIPNPEE QKFYNIPHTP
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