| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2165 |
|---|
| Symbol | |
|---|
| ID | 4483976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2661111 |
|---|
| End bp | 2663612 |
|---|
| Gene Length | 2502 bp |
|---|
| Protein Length | 833 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639722909 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_866072 |
|---|
| Protein GI | 117925455 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.302427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGA CGACTTCCTT CGATCTTGGT CAGATACTCA CAAATAATTT TGGCGAACGC
TATCTGCAAG GCATCAATGG AGAATCTTTC TCCCGCATGG GTTCGGTCGC CTATTTTAAG
CAGCACTACG GTAAAGCCCT ATGGGGCCCT GATAAGCTAA CCATCGTGTT GGGGACCGAC
TCCGGTCTAT TGGTCCACTA TATTTTAGAG CATATCCACG CCGAAGATAC CACCAGCCGG
GTACTGTTTA TTGAATTAGA AGATGTGCTG GAACGCTTGC AACAAGAAGA GCTCTTACCC
AAAACCATCC CTGGGCGTGT GGATGTGGTT TCTATGGCGC AGTGGCTAGA GCGCGCCAAA
GAGGCTTTTA ACTTTTCGGA CTACCTGTTT TTAGACGCGG TTAACCGGGT TCAGTCCGTG
GGGGCTCAAG ATGCTCTGCA CCCGCACTAT CTAGGGCAAT GGGATAGCTT AACCAACGAA
TTTTTACAAT TTAGCACGGT TGTCAAAATG CAGACCGGCA ACCAGATTTT TGCCCATGCC
GGGCTAAAAA ACCTTGCCGA AAACCGTTTG CGCGCCCAAC AGCTACACGG TCTATTTAAG
GGCAAAACAG CGGTTATTCT TGCTGGTGGT CCCTCGCTGC TGGAGAGTTT AGCGCACGTT
AAAGCCAACC GCGACAAGCT GGTGGTGATT GCCGTAGCCC GTATAGCCGG CACCTTGTTG
AAAGAGCAGA TCACCCCCGA TTTTATTTTC TCGATTGATC CCCATGAGGT CTCTTTTAAT
AACAGCCACG AGATGCTGCA TTTTTGGGAA AAGAGTTTTT TTGTCAACCT CTACCACGTG
ACCCCCATGC TGCTGGGTCA GTGGCGGGGA CGCAGTGCCT ATATTGGTCC ACTCTTTCCC
TGGAAAAATG AGATTGACGG CGAAAATCAA CTGCCCAGCT ACCCCGGCAT TACCGTCTCG
CACCAAGCCA TTGGCTGCGC CATTGATATG GGCTTTAGCC AAATCATTTT GTGCGGAATT
GATCTCTGTT TTAGTAAAGA GGGTTATACC CATGCCAAAG GCTCCATGGA GAGCCAGATT
GGCCCCTTTT TAGCCGACTC CAGTTTTCGG GTTGAAACCA ATGCCGGTGA CATAGCCGAG
AGCCGTTTTG ATTTTTATAG TGCCATCCCC TCGCTGGCCT ACCTTGCGGC CTATGCTGAA
GAGAAGGGGT GTCAACTCAT CAATCCCGCT CCACAGGCGG CCAAAATTGA ACGGGTCGCT
CATCTGGGTT GGGATACTCT AAACTTTGCC CCCATGGCCC AACCGGTAAC AACCTATCTG
CAAGAGCAAC TTCCACCAGA AACCCGCGCC AGCAGATTGG CCCACTACGA ACTTGTGCTA
ACAGAACTGC TGCATGCTCG CAATGAGATT AGCCAAGTGC GCAAGTTGGC CGAAGAGGCG
CTGGTTTGCA ACAAACGGCT GTTTGGTAAA AAGGGCAAAC CGGGTGATTA CTCGGCCAAG
CTGCGCATGG ATCAAATTGA AGAGACGCTG GATAAGCAAC ACCCAACCTT TTCGACTTTG
GTCAAACAGT GGGGCATTCA ATCCTTTTTA CGCCTGATCC GTGCCGATAA AGAGAAAGCC
TGGACCGACG AAGAGATTGA GCTAACCGGC GAGCGCTACT ACCAAGCCTA CAAACAAGGT
GCACAGCAAG CGGTTCAACT ACTCAACGAA ACCATCCACC GGGTACAGAT GCGTATAGAG
GAAGAGAAGC CCAAACCCAA TCTAAAAAAT TTGCTGCGTC AGTGGGAGGA GGATGCCCAG
CCCAACCGCC TTACCCTCTT TACCCAACGA CAGCAAATCG ATTTAGCGGG CTTTCCCGAC
AAGTTGCGCA GCCGCTTTGC CCTTTTGCAA GCGCAATTTG ATAACCAGTT GAGCCAGGAA
GAAGCCAAGC TTAAATTGGT GTTGGCGACC AGTGGCAACA TCATAACAGC CCGCAATAAA
TTACGAAATT TGTTCCGGCA TCAAAGCATG CAAGCCTTAA AAGATCTGCG CAACGGTTTG
ATGAACAGTC AGTTTGAGTT TAAACATGCT CTGAATGAAC TCACGCAGGG CTATATTTTG
GAGCTTGAAG GCGAGCTAGA GGCCGCCATG GATTGCTACG CCAAAGTTGA ACGGCCAGAG
CTGTTTGAAG AGGCCCAGAC TCACATGTTG CAAATTTTGC TCAAACAAAA CCGTATTGAA
GAGAGCTTGC CGGTGTTGGA GGCCATGGCT AACTTTAACC CCAGCAAGCT CCCCTACTAC
GCCACCATGC TTGGCTTGAC AGGCCGTGCA GAAGCCGCCA AAGTGGCTTT TGACCACTAT
TTGGAGCTGG CCCCACAAGA TCTGTTAACC CGCTTAAAAT ATGCACAAAT GCTCTTCAAA
AATCAGCGCC ACGCAGCTTG CCAGCAGCAG TTACAGCGGA TTCTTGCACA AGATGCCAGC
AACCAAGCGG CGCAACAGAT GCTTGCCCAA CTAAACACTT AA
|
|---|
| Protein sequence | MNETTSFDLG QILTNNFGER YLQGINGESF SRMGSVAYFK QHYGKALWGP DKLTIVLGTD
SGLLVHYILE HIHAEDTTSR VLFIELEDVL ERLQQEELLP KTIPGRVDVV SMAQWLERAK
EAFNFSDYLF LDAVNRVQSV GAQDALHPHY LGQWDSLTNE FLQFSTVVKM QTGNQIFAHA
GLKNLAENRL RAQQLHGLFK GKTAVILAGG PSLLESLAHV KANRDKLVVI AVARIAGTLL
KEQITPDFIF SIDPHEVSFN NSHEMLHFWE KSFFVNLYHV TPMLLGQWRG RSAYIGPLFP
WKNEIDGENQ LPSYPGITVS HQAIGCAIDM GFSQIILCGI DLCFSKEGYT HAKGSMESQI
GPFLADSSFR VETNAGDIAE SRFDFYSAIP SLAYLAAYAE EKGCQLINPA PQAAKIERVA
HLGWDTLNFA PMAQPVTTYL QEQLPPETRA SRLAHYELVL TELLHARNEI SQVRKLAEEA
LVCNKRLFGK KGKPGDYSAK LRMDQIEETL DKQHPTFSTL VKQWGIQSFL RLIRADKEKA
WTDEEIELTG ERYYQAYKQG AQQAVQLLNE TIHRVQMRIE EEKPKPNLKN LLRQWEEDAQ
PNRLTLFTQR QQIDLAGFPD KLRSRFALLQ AQFDNQLSQE EAKLKLVLAT SGNIITARNK
LRNLFRHQSM QALKDLRNGL MNSQFEFKHA LNELTQGYIL ELEGELEAAM DCYAKVERPE
LFEEAQTHML QILLKQNRIE ESLPVLEAMA NFNPSKLPYY ATMLGLTGRA EAAKVAFDHY
LELAPQDLLT RLKYAQMLFK NQRHAACQQQ LQRILAQDAS NQAAQQMLAQ LNT
|
|---|
| |