| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2158 |
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| Symbol | |
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| ID | 4483969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2651565 |
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| End bp | 2653322 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639722902 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_866065 |
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| Protein GI | 117925448 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.625717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.662886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATGA CGAATCCGTA CTTGGAATCG GTTACCCAAT GGGAGTTTGA TGAGTGCTCC
TTTGAAGAGG GTACCGACAA GATTGTTGCT TATGGTGAGG CCAGCGGTTA CTGCCCCACT
TATCAGGAGC GTGTACCGCC TTGTACCAGT GCATGTCCCG CAGGTGAGGA TATTCGTGGG
TATAACAACA TTGTGCGCGG TGTTTGGGGT TCTGACGATC CCTACGCCAC TGCGTTTCAG
CGTTTAACCC GCAAAAATCC TTTTCCTGCT GTCATGGGCC GTGTTTGCCC TGCCCCGTGT
CAGGGTGGGT GCAACCGTCA GTACCGTGAT GAGACCATTG GCATTAATGC TATCGAGCAT
GCCATTGGTC AGTATGCCAT CGAAAAAGGG CTGAAGTTTG ACAAGCCTGA AGTCGCCTCT
ACCGGCAAGC ATATTGCGGT GGTGGGTGGT GGTGTTGGGG GTCTTTCCAA CGCTTACCAA
ATGGTGATGC GTGGGCATAA GGTCACGCTG TTTGATCGTG ACGAGAAGCT GGGCGGTATG
CTCCGCTATG GTATTCTTGG TTATCGTGTC TCCCGTGCTG TAATCGATGC GGAAGTTCAG
CGTATTTTGG ACTTGGGTGT AGAGGTCAAA TCCGGTGTGA CCATCGGTAA AGACATCACC
CTTGAGCAGC TGAGCAAAGA TTATGATGCG GTGTTTTTGG CTGTGGGTGC ACAAAAGGGG
CGTACCATTC CCCTGCCCGG CAGCGAAGGC AAAGCTCTTG TGAAGTCTGC CATTGATTTC
CTGCGTGATT TTGAAATCAA TGGTGGGATT GAAGCGGGCG GTGCGGACAA GGTTAAGGTT
GGTAAAAACG TTGTGGTCAT TGGTGACGGC GACGTGGCCA TGGATGCATG CCGTTTGGCC
CTGCGTCTTG GTTCCAAAGC CACCTTACTT TCCGGCGTAG CCCGGGAAGA GATGAACTGC
TCGGCTTTTG AGTATGACGA AGCTTTGGCA GAAGGGACCG ACATGAAAAT GTGTACCGGT
TCCTTGGAGA TCACGGGTGA AGGTGACACG ATCACGGGCA TTAAAGTGAT CGAGATGGCG
CGTAAAGAGA AGGGTGAAGA TGGTTGGAAC CATGCTGTTC CCTTTATGCG TTATAAGCAA
AAAGCCGGTT CTGAGGCGAC GGTAGCCTGT GACATGGTGG TTTGGGCTGT GGGTCAAACC
ACCGACATGG CCGGTTTTGA GTCTTGCACC AACGGTACCC CTTTCTTACA AGTTGACCAT
AACTTCCAAG TGAAGGGTAT GGACAATGTG TTTGGTGGTG GTGACGCTGT GCAGATTCAT
CTGCTAACCA CCGCGATTGG TCATGGTCGT AAGGCCGCCG AAGCGATGGA CACCTTCCTT
AAGGGTGGCA AGCTGCCTTC CAAGGCGGCA CGCGAGGATG TGGTTAAGTT CGATAAATTG
AAGTCTGATT TTTTTGTCGA AAAAGCACAA GCCAAGCGCA AGATTGTTCA CCCTGCCAAC
GTGGTTGGCA ATTGGGAAGA GACTTTGCAA CAACTTTCTG CTCAATCCAC CAAGGAAGAG
GCCGATCGTT GCATGAGCTG TGGTATGTGC TTTGAGTGTA ACCAGTGCAT GCTCTTCTGC
CCCCAGGATG CCATTACCAA GTTTAAGGGT AATGCTGAGG GTGAGGTGAT GTTCACCTAC
TACGAGCGTT GTGTTGGTTG TCATATCTGT TCGGAAGTCT GCCCCACCGG TTACATTGAC
ATGGGTATGG GCAATTAA
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| Protein sequence | MVMTNPYLES VTQWEFDECS FEEGTDKIVA YGEASGYCPT YQERVPPCTS ACPAGEDIRG
YNNIVRGVWG SDDPYATAFQ RLTRKNPFPA VMGRVCPAPC QGGCNRQYRD ETIGINAIEH
AIGQYAIEKG LKFDKPEVAS TGKHIAVVGG GVGGLSNAYQ MVMRGHKVTL FDRDEKLGGM
LRYGILGYRV SRAVIDAEVQ RILDLGVEVK SGVTIGKDIT LEQLSKDYDA VFLAVGAQKG
RTIPLPGSEG KALVKSAIDF LRDFEINGGI EAGGADKVKV GKNVVVIGDG DVAMDACRLA
LRLGSKATLL SGVAREEMNC SAFEYDEALA EGTDMKMCTG SLEITGEGDT ITGIKVIEMA
RKEKGEDGWN HAVPFMRYKQ KAGSEATVAC DMVVWAVGQT TDMAGFESCT NGTPFLQVDH
NFQVKGMDNV FGGGDAVQIH LLTTAIGHGR KAAEAMDTFL KGGKLPSKAA REDVVKFDKL
KSDFFVEKAQ AKRKIVHPAN VVGNWEETLQ QLSAQSTKEE ADRCMSCGMC FECNQCMLFC
PQDAITKFKG NAEGEVMFTY YERCVGCHIC SEVCPTGYID MGMGN
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