| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2151 |
|---|
| Symbol | |
|---|
| ID | 4481416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2640766 |
|---|
| End bp | 2642889 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639722895 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_866058 |
|---|
| Protein GI | 117925441 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.461641 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTTGCGT TTGGGACGAT TGCAAGAGGG GCGCTTATAT GGTCTAATGT GGCGCTTATC
TATGCAACAA AATGGTTTAT CGACAAAGAC CCCGTTACTT CACGCCTCCT TGGGAGCCTC
TGTAAGGTTA TGACCGCCCC CCTAAGCCTC ACCACACGTA TTGGTATGAT CGTCTTTCTC
TCCGCTTTTA TTGTGGGCCT TTCTGCCACC ATCGCTACGG TGGCAGAGCT GCACCAAAAG
GGGGATCGTG AAGCCCAGGA TGCCATCAAC CGCAATATGC GGGTGGCTTG GCATGAAGTG
AAAAAAATAG GCACCACCTA TATGCTAAAA AAGGACGGGC TCTATGCTGG AGATTTTCGT
CTGAATGGTC ATAATGAACT GGTGGATACC ATCTCTACCC TAGTGGGTGG GACCGCGACG
GTTTTTATGG GGGATACCCG TGTGGCGACC TCTGTAAAAA AGGCCGATGG CAACCGTGCC
ACGGGTACCA AGTTGGCTCG TAATGCCGCT TATAGGCATG TTTTTGAGGA AAAAACCCCA
TTCCGTGGGG TGGTAGAGAT TCTGGGCACC CCCTATATTA CCGGTTATGA TCCCATCTTG
GATGCCAAGG GCGATGTGGT GGGGATTCTC TATGTGGGCA TTAAAACGGC GGAGTTTTAT
GCCTCCATTG AGCAGGTGCA GTACTGGATC ATCGGTATTA CCCTGATTTG CGGTAGCTTG
GTGGTATTGG TGACGGTGTT TTATGTGCGG CGCATGATTG GGGCCCCGAT CAACCATGTT
GTCACCATTC TCGGTAAGGT GGCCCAAGGG GATCTAACCG TCAATTTACC CCCTTCTGCA
AGGGAGGATG AAATTGGGCG CACCATTGAA GCAACCCGCA TCATGGTCAA CAGCCTGCGT
GAAATTATTG ACAGTATGGG GCGTACAACC AAAAGTCTCA ATGGTGCAAC AGGGCAACTG
AGCAGTATAT CGAGTGATTT AAACCATAGT TCACTCTCCC TAAGTGGTCA CGCCTCACAA
GTGGCCAACG CCAGCCAAGC GATGCACAAC ACTCTAAGTC GTGTCGGTAA TGCCAGTGAT
GGTATGAACC GCGCCATGCA GCAGGTTTCT GAAAGTGCCG TGGAGATGGG TCAAAATATG
TCGACCATCT CAGCCGCAGC GGAGGAGGCC AACGTCAACC TATCCACCGT GGCCTCCGCC
ACGGAAGAGG TGACGGTGAA TATGGATGAG GTCAATTTGG CCGCCCAGCG CACCGGTGGC
AATGTGACGG AAGTGGCCAA CTCGGTGGAG GCCCTAACGA CCACCATTGA TGCTGTGCGT
AACCGCTGTG AAGAGGCCAA CCAGGGTGCC GAAGCGGCAT CCAGCACGGC AAAAGAGACC
TATGGGGTGA TGGAAGCCCT TGCCCGTTCG GCCAAAGAGA TTAACAAGGT GGTTTCGGTA
ATTAACAATA TTGCCCAACA AACCAATATG TTGGCACTTA ATGCTTCCAT TGAGGCCGCT
GGGGCGGGGG AGTCAGGTAA GGGGTTTGCG GTGGTGGCCA ATGAGGTTAA GCAACTGGCC
AGTCAAACCA GCGAAGCCAC CAGCAGTATC GCGGCCCAGA TTGACGAAAT CCAAAATCAG
AGCCGTCAAG CCGGCAAGGC GTCGCAAAAT GTGGCGGAAA TCAATGGTAA ATTGGCAGAG
GTGATTGAGG ATATTCTTAG CGCTGTGGAA GAACAGAGCG GCACTGTGGC GGCGATCTCT
CGCTCCATGG CAGAGGTCAA CCATGAAACC CGCGAGGTGA GCCACCGGGT GGAAGAAGCC
ACCGCAGGCT CCCAAGAGGT GGCCCGTAGT GTACAGGAGA TCGCCCTGGG TATTAATGAA
GTCACCCAGA GCGTGGTACA CGCCTCCACA GGGGTACAGG GCATGGTTCA GCTGGTCGCT
AACTCATCCC AAGCCAGCCG TGAAATAACC CAGCAGGTGC AGGCCTCCTC ACAATCGGCG
CAGAAGGTCG CCCAGAGTAT GGGCGAGGTC AACGATGCCG CCCAGCGTAT GACCCAACTG
AGCGGTGCAG TACAAAATCA GGCGGTGAAT ATGGGGCAAA TTGCCAATGA ATTGGGCCAG
ATTCTAAACC GATTTAAAGC GTAG
|
|---|
| Protein sequence | MVAFGTIARG ALIWSNVALI YATKWFIDKD PVTSRLLGSL CKVMTAPLSL TTRIGMIVFL
SAFIVGLSAT IATVAELHQK GDREAQDAIN RNMRVAWHEV KKIGTTYMLK KDGLYAGDFR
LNGHNELVDT ISTLVGGTAT VFMGDTRVAT SVKKADGNRA TGTKLARNAA YRHVFEEKTP
FRGVVEILGT PYITGYDPIL DAKGDVVGIL YVGIKTAEFY ASIEQVQYWI IGITLICGSL
VVLVTVFYVR RMIGAPINHV VTILGKVAQG DLTVNLPPSA REDEIGRTIE ATRIMVNSLR
EIIDSMGRTT KSLNGATGQL SSISSDLNHS SLSLSGHASQ VANASQAMHN TLSRVGNASD
GMNRAMQQVS ESAVEMGQNM STISAAAEEA NVNLSTVASA TEEVTVNMDE VNLAAQRTGG
NVTEVANSVE ALTTTIDAVR NRCEEANQGA EAASSTAKET YGVMEALARS AKEINKVVSV
INNIAQQTNM LALNASIEAA GAGESGKGFA VVANEVKQLA SQTSEATSSI AAQIDEIQNQ
SRQAGKASQN VAEINGKLAE VIEDILSAVE EQSGTVAAIS RSMAEVNHET REVSHRVEEA
TAGSQEVARS VQEIALGINE VTQSVVHAST GVQGMVQLVA NSSQASREIT QQVQASSQSA
QKVAQSMGEV NDAAQRMTQL SGAVQNQAVN MGQIANELGQ ILNRFKA
|
|---|
| |