Gene Mmc1_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2149 
Symbol 
ID4481414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2637781 
End bp2639691 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content53% 
IMG OID639722893 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_866056 
Protein GI117925439 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0850396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.444632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAACG TAATGCGCAA AAGCGCCAAC AGCTGGGTCA TCAAAATCCT GCTGATTCTG 
ATTGCCGTCT CTTTCTCCGT CTGGGGGATC GAGGGACTTA GAAATGCCGG GCGTGATACA
CCGGTGTTGA CGGTAGAGAA TTGGTCGGCT TCCCAAGGCT ATATTCGGCA ATCCTTTGAT
CGTTTTCTGC GTGAACAGAA ACAGCGCCTG GGCAATCTGC CCCTGGATAA TCCAATGATT
CGCCAGCAAC TGCGCCAACA GTTTTTGCAA CGCATGGTGG ACGAACAACT CATGCTGCAT
AGTGCCATGC AGATGGGTCT AACCCTCTCC CCCAAGGGGT TACAAAAGAC CATCGCCGAG
GATCCCACCT TTCAGCTCAA GGGCAAGTTT GACGATGCCC TCTATCGGCA ATTGCTGCGG
CAAAACCGGC TCGACCCCAA AACCTTTGAG CAGGATACTC TGGTACGACA CGCTCGGGCC
CATCTTGCCC AGGGTTTGAC CCAAGTAGCC ACCACACCCA CCCTGCTGTT AGATGATGCC
CTCAAGCAGG AGAGCGAAAA ACGACGGGTG GCGCTGCTGA TGTTGGACCA AGCAACCCTA
GCCAGCGTGG ATGATCCTGG TGACGAAGCC CTGCGTGCCT ATCAAGAAAA CAACCGCGAT
GCCTACTCCA TCAAGCAGCG GGTTAAAGTT CGCTATCTGT TGCTGGATGC CGAGAGTGTG
CGCGACGAGC TGAAAGTAGA TGAGGCCAAA ATCATCGCCT ACTATGATGA CAATAAACCG
CTGTACAAGA CCCTGGAAAG CCGCAAACTT CGGCATATCC TGGCCAAATT CAAGGCCGGC
GATGCCACCG CCAAAGCAGC GGCCCAGAAA AAGATTGAGG ATGCCAAGCA GCGCATTGCT
AACGGTGAAA GCTTTGCCGA GGTAGCCAAA CTGCTCTCAG AAGATGTCAC CGCCAGTCAA
GGGGGGGAAT TGGGGGTATT CCAACGGGGG GGCGGCTTGG TTGAGCGTTT TGAAGAGGCC
GCCTTTACCC TGCCCGAGGG CAAGGTTTCG GAGGTTGTGG AGAGCCCCTT TGGTTTTCAC
TTGATCCTGG TTGACCATAT TGATCCAGCT GGCACCCGTA GCTTTGAGCA GGTTAAACCC
GAAATTGCCG AACAACTCTT TCAAGAGGGC GCTGGCGAAG CGATCTACAG CAAGTCGATT
GCGTTGGAAG ATATGCTCGC CACCGCCGAT AGCTTGGCCA CCATCGGCAA GGAGCTAAAC
CTGCGCTTTA AGGAGACCGG CTGGATTGAG TTCAGCAAGC TTGACGAAAC GGTCTCTATC
GAACGCGAAG CCAAGTTTCA TGAAGTGGCC TTTTCTACCC TGAAAGGGGA ACGTAGCACC
TTGGTGGAGC TAGCCAACAA CCGCTATTTT GTGTTGGAAG TAACCGACCA TGAGGACGCC
ACCTTAAAAC CCTTGGCCGA AGTACGTGCC GCATTACTGG CTGCCTATCG TCAGGAAAAA
GCTCAAACCC AGGCCCAAGA GCTAATGGAT AATGCCCTAA AAGCCTTAAA CAGCGGCAGC
AGTTGGGAAG AGGTTGCCAA AAGCCACGCA CCATTCCAAG CCCAGGCTCC GGCCCCCTTT
ACCGCAATGG ATAAAGAGAG CAAGGTTCCT GCGAACGTGC GTCAAGCAGC CTTCCGTATC
GCGCTGGACA AGCCGATTTA CGAAAAGGTT ATCAGCGAGG GAAATCATCG CTATATCCTA
AAATTGCTCG AAGTCACCCC CGGCACGGTT GACACCGATA TGCTCGCCAA TAGCCAACTT
CAAGCGATGT TTACCAACAT GCTGGGCAAT GAAATGCGCG AAGCCTTTAT GGCTTGGCGC
CGTAAACATG CAGAGATCAG CTATGACCCC AAGGTATTCA ACAACCTCTA A
 
Protein sequence
MLNVMRKSAN SWVIKILLIL IAVSFSVWGI EGLRNAGRDT PVLTVENWSA SQGYIRQSFD 
RFLREQKQRL GNLPLDNPMI RQQLRQQFLQ RMVDEQLMLH SAMQMGLTLS PKGLQKTIAE
DPTFQLKGKF DDALYRQLLR QNRLDPKTFE QDTLVRHARA HLAQGLTQVA TTPTLLLDDA
LKQESEKRRV ALLMLDQATL ASVDDPGDEA LRAYQENNRD AYSIKQRVKV RYLLLDAESV
RDELKVDEAK IIAYYDDNKP LYKTLESRKL RHILAKFKAG DATAKAAAQK KIEDAKQRIA
NGESFAEVAK LLSEDVTASQ GGELGVFQRG GGLVERFEEA AFTLPEGKVS EVVESPFGFH
LILVDHIDPA GTRSFEQVKP EIAEQLFQEG AGEAIYSKSI ALEDMLATAD SLATIGKELN
LRFKETGWIE FSKLDETVSI EREAKFHEVA FSTLKGERST LVELANNRYF VLEVTDHEDA
TLKPLAEVRA ALLAAYRQEK AQTQAQELMD NALKALNSGS SWEEVAKSHA PFQAQAPAPF
TAMDKESKVP ANVRQAAFRI ALDKPIYEKV ISEGNHRYIL KLLEVTPGTV DTDMLANSQL
QAMFTNMLGN EMREAFMAWR RKHAEISYDP KVFNNL