Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2149 |
Symbol | |
ID | 4481414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2637781 |
End bp | 2639691 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722893 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_866056 |
Protein GI | 117925439 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0850396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.444632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAACG TAATGCGCAA AAGCGCCAAC AGCTGGGTCA TCAAAATCCT GCTGATTCTG ATTGCCGTCT CTTTCTCCGT CTGGGGGATC GAGGGACTTA GAAATGCCGG GCGTGATACA CCGGTGTTGA CGGTAGAGAA TTGGTCGGCT TCCCAAGGCT ATATTCGGCA ATCCTTTGAT CGTTTTCTGC GTGAACAGAA ACAGCGCCTG GGCAATCTGC CCCTGGATAA TCCAATGATT CGCCAGCAAC TGCGCCAACA GTTTTTGCAA CGCATGGTGG ACGAACAACT CATGCTGCAT AGTGCCATGC AGATGGGTCT AACCCTCTCC CCCAAGGGGT TACAAAAGAC CATCGCCGAG GATCCCACCT TTCAGCTCAA GGGCAAGTTT GACGATGCCC TCTATCGGCA ATTGCTGCGG CAAAACCGGC TCGACCCCAA AACCTTTGAG CAGGATACTC TGGTACGACA CGCTCGGGCC CATCTTGCCC AGGGTTTGAC CCAAGTAGCC ACCACACCCA CCCTGCTGTT AGATGATGCC CTCAAGCAGG AGAGCGAAAA ACGACGGGTG GCGCTGCTGA TGTTGGACCA AGCAACCCTA GCCAGCGTGG ATGATCCTGG TGACGAAGCC CTGCGTGCCT ATCAAGAAAA CAACCGCGAT GCCTACTCCA TCAAGCAGCG GGTTAAAGTT CGCTATCTGT TGCTGGATGC CGAGAGTGTG CGCGACGAGC TGAAAGTAGA TGAGGCCAAA ATCATCGCCT ACTATGATGA CAATAAACCG CTGTACAAGA CCCTGGAAAG CCGCAAACTT CGGCATATCC TGGCCAAATT CAAGGCCGGC GATGCCACCG CCAAAGCAGC GGCCCAGAAA AAGATTGAGG ATGCCAAGCA GCGCATTGCT AACGGTGAAA GCTTTGCCGA GGTAGCCAAA CTGCTCTCAG AAGATGTCAC CGCCAGTCAA GGGGGGGAAT TGGGGGTATT CCAACGGGGG GGCGGCTTGG TTGAGCGTTT TGAAGAGGCC GCCTTTACCC TGCCCGAGGG CAAGGTTTCG GAGGTTGTGG AGAGCCCCTT TGGTTTTCAC TTGATCCTGG TTGACCATAT TGATCCAGCT GGCACCCGTA GCTTTGAGCA GGTTAAACCC GAAATTGCCG AACAACTCTT TCAAGAGGGC GCTGGCGAAG CGATCTACAG CAAGTCGATT GCGTTGGAAG ATATGCTCGC CACCGCCGAT AGCTTGGCCA CCATCGGCAA GGAGCTAAAC CTGCGCTTTA AGGAGACCGG CTGGATTGAG TTCAGCAAGC TTGACGAAAC GGTCTCTATC GAACGCGAAG CCAAGTTTCA TGAAGTGGCC TTTTCTACCC TGAAAGGGGA ACGTAGCACC TTGGTGGAGC TAGCCAACAA CCGCTATTTT GTGTTGGAAG TAACCGACCA TGAGGACGCC ACCTTAAAAC CCTTGGCCGA AGTACGTGCC GCATTACTGG CTGCCTATCG TCAGGAAAAA GCTCAAACCC AGGCCCAAGA GCTAATGGAT AATGCCCTAA AAGCCTTAAA CAGCGGCAGC AGTTGGGAAG AGGTTGCCAA AAGCCACGCA CCATTCCAAG CCCAGGCTCC GGCCCCCTTT ACCGCAATGG ATAAAGAGAG CAAGGTTCCT GCGAACGTGC GTCAAGCAGC CTTCCGTATC GCGCTGGACA AGCCGATTTA CGAAAAGGTT ATCAGCGAGG GAAATCATCG CTATATCCTA AAATTGCTCG AAGTCACCCC CGGCACGGTT GACACCGATA TGCTCGCCAA TAGCCAACTT CAAGCGATGT TTACCAACAT GCTGGGCAAT GAAATGCGCG AAGCCTTTAT GGCTTGGCGC CGTAAACATG CAGAGATCAG CTATGACCCC AAGGTATTCA ACAACCTCTA A
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Protein sequence | MLNVMRKSAN SWVIKILLIL IAVSFSVWGI EGLRNAGRDT PVLTVENWSA SQGYIRQSFD RFLREQKQRL GNLPLDNPMI RQQLRQQFLQ RMVDEQLMLH SAMQMGLTLS PKGLQKTIAE DPTFQLKGKF DDALYRQLLR QNRLDPKTFE QDTLVRHARA HLAQGLTQVA TTPTLLLDDA LKQESEKRRV ALLMLDQATL ASVDDPGDEA LRAYQENNRD AYSIKQRVKV RYLLLDAESV RDELKVDEAK IIAYYDDNKP LYKTLESRKL RHILAKFKAG DATAKAAAQK KIEDAKQRIA NGESFAEVAK LLSEDVTASQ GGELGVFQRG GGLVERFEEA AFTLPEGKVS EVVESPFGFH LILVDHIDPA GTRSFEQVKP EIAEQLFQEG AGEAIYSKSI ALEDMLATAD SLATIGKELN LRFKETGWIE FSKLDETVSI EREAKFHEVA FSTLKGERST LVELANNRYF VLEVTDHEDA TLKPLAEVRA ALLAAYRQEK AQTQAQELMD NALKALNSGS SWEEVAKSHA PFQAQAPAPF TAMDKESKVP ANVRQAAFRI ALDKPIYEKV ISEGNHRYIL KLLEVTPGTV DTDMLANSQL QAMFTNMLGN EMREAFMAWR RKHAEISYDP KVFNNL
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