| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2137 |
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| Symbol | |
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| ID | 4481402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2621244 |
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| End bp | 2622530 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639722881 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_866044 |
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| Protein GI | 117925427 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0123809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.887659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGTTA TACTCCTCTT TCTTGGTTTG ATCTTTTTGT TGCTAATCGG GGTGCCCATT
GCCATCAGCC TGGGGTTATC CAGCCTGCTG TTTGTTTTGT TTGCCGGCGA AGATCCCTCC
ATGGCGATTA CCGTTGCGCA AAAGCTCTTT AGTACCATGG AGCACACCAC CTTATTGGCG
ATTCCGTTTT TTATTCTCTC GTCACACTTT CTCACCACGG GCGGGGTTTC GCGCCGTTTG
ATTGAGTTTG CCAAAGCGCT GGTGGGTTGG ATGACCGGTG GTCTGGCCAT GGCGGGGGTG
GTCTCTTGCA TGTTGTTTGC GGCGATTTCG GGCTCTTCTC CGGCCACGGT GGTTGCCATT
GGCTCAATCA TGATACCGGG CATGATCTCG GCTGGGTATG ACAAACGCTT TGCGGTGGGG
GTGATCGCCA CCTCGGGCTC GTTAGGCATT TTGATCCCGC CCTCGATCCC TATGATTGTC
TATGCCGATG CGGTGGAAGA GTCGGTGGGG AAAATGTTTA TCGCGGGTAT TTTGCCGGGT
CTATTGATGG GCTCTATGTT GCTGCTGGCC ACGTGGGTTG CGGCCAAACG TATGAACATG
CCCAAAGAGC CTTGGCAGGG ATTTTCCCAC CTGATCAAGA CGTTTTTAAA AGCGTTTTGG
GGCTTGTTGC TGATCGGTAT TGTGGTTGGT GGCATTTATG GAGGGATCTT TACCCCCACC
GAAGCGGCCG CTGTGGCGGC GGTCTATTCC GCCTTTATCG CGCTGTTTGT GCACCATGAT
ATGGGGTTCA AGGAGATCCC CAAGGTGATG TTGGATTCTG CCAAGATGAC CGCCATGTTG
ATGTTCATCA TCGCCTGTGC CATGATCTTT GCCCATGTGT TGACCGAGGA GCGCATTCCC
CAAGAACTGG CGGCCCAGGT GATGGCGAAT AATCCATCGC CTTACATGTT TTTGCTGTTG
GTGAATGTGA TCCTATGGTT TGCCGGTGAT TTTATGGAAC CCTCGGCGAT TTTGCTTATT
CTATCGCCGC TGTTCCATCC CATCGCTGTG AGTTTGGGTA TTGATCCGAT CCATCTAGGT
ATTATCATGA CCACCAATAT GGAGGTGGGT ATGATCACCC CACCGGTGGG GCTTAATCTC
TATGTGGCGG CAGGTTTGTC GGGTATGAGT TTGGGGGCTG TCACACGCGC GGCGATGCCG
TGGATGTTTG TGCTGATTGC CGCCTTGGTG GTCATTACCT ATGTGCCATG GTTGAGTTTG
GTGTTGGTCA ATCTGCTTTA CGGTTGA
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| Protein sequence | MTVILLFLGL IFLLLIGVPI AISLGLSSLL FVLFAGEDPS MAITVAQKLF STMEHTTLLA
IPFFILSSHF LTTGGVSRRL IEFAKALVGW MTGGLAMAGV VSCMLFAAIS GSSPATVVAI
GSIMIPGMIS AGYDKRFAVG VIATSGSLGI LIPPSIPMIV YADAVEESVG KMFIAGILPG
LLMGSMLLLA TWVAAKRMNM PKEPWQGFSH LIKTFLKAFW GLLLIGIVVG GIYGGIFTPT
EAAAVAAVYS AFIALFVHHD MGFKEIPKVM LDSAKMTAML MFIIACAMIF AHVLTEERIP
QELAAQVMAN NPSPYMFLLL VNVILWFAGD FMEPSAILLI LSPLFHPIAV SLGIDPIHLG
IIMTTNMEVG MITPPVGLNL YVAAGLSGMS LGAVTRAAMP WMFVLIAALV VITYVPWLSL
VLVNLLYG
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