Gene Mmc1_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2127 
Symbol 
ID4483949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2609305 
End bp2609580 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content51% 
IMG OID639722871 
Producthistone family protein DNA-binding protein 
Protein accessionYP_866034 
Protein GI117925417 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.053559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT CACAGTTGAT CCAAATGATC GCGGAGCAAC ATAATTTATC CAAACAGAAC 
GCCGAATTGG CGGTTTCACT GGTGTTGGGA GAAATTGTCA AGGCTATGGA ACGTGGGGAA
CGTGTTGAAC TGCGTGGTTT TGGGGTGTTT GAGGTGCGCC ATCGCCAATC CCGCCAAGCC
CGTAACCCCA AAACAGGTGA TTCCGTGGCC GTATCGGAAA AACGTGTGCC CTTCTTCAAG
GCTGGTAAAG AGATGCGTGA ACGGGTTGAC CACTAA
 
Protein sequence
MTKSQLIQMI AEQHNLSKQN AELAVSLVLG EIVKAMERGE RVELRGFGVF EVRHRQSRQA 
RNPKTGDSVA VSEKRVPFFK AGKEMRERVD H