Gene Mmc1_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2125 
Symbol 
ID4483947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2606241 
End bp2608220 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content54% 
IMG OID639722869 
ProductABC transporter related 
Protein accessionYP_866032 
Protein GI117925415 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.457352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACACC TGGAAAAAGT TGAAAAAAGA TATGGTGCTA CCATCATTCT CAGCGGCACT 
GATCTGGTTA TTCATCCAGG GGAAAAGGTG GGCTTGATTG GACTAAATGG TATGGGCAAA
ACCACCCTCT TTCGCATTAT TGAGGAGGTT GAACCCTTGG ATGGTGGACG GCTGGATCGT
CACCCTCCAC ACATGCGCAT TGGTGTTTTG CGTCAGGAGC TTACCCCAGC GCACCGTTCT
ATTTTACAAG AAACCCTGGG CGGTCTGCCC CAGTTGGTGG CACTTAATAA TGAACGCGAA
GCGCTACATA GCAAGATGGT TGAACACCCT GAGCATGATG CGTATCACCA GTGGGTCATG
CGTCTGGGTG AGGTGGATCA TGCCTTGGAA GATCTGGATG CCTACAGTGC CGAGGCCCGC
GCTGGGGCTA TTTTGTTGGG TTTAGGCTTC TCAACCGCCG ATTTAGAAAA GCCGCTGGAT
GCCTTTTCTG GGGGCTGGCG CATGCGGGTT GCCCTGGCCC AGCTGCTCTT TTCGGCCCCT
GACCTCATGT TATTGGATGA ACCAACCAAC CACTTGGACC TGGAGTCGGT GGCATGGCTG
GAGCGCTATC TGGCAGGTTT GAGTGGGGCT TACATGCTCA TTTCCCATGA CCGTGATTTT
CTACAGCGCA CCACGCGGGT AACGGTTGAG TTGGAGGATG GCAAGCTCAC CCGCTACAAA
GGCAGTTTTG ATGCCTATAT GAACTGGAAG ATTGAGCAAG CGGAGTTATT GAGCAAACAG
GCCGCCAAAC AAGCTGATAA GTTAGAAGCC ATGCAGCGCT TTATCAGCCG TTTTCGCGCC
AAGGCCACCA AAGCCAAGCA GGTGCAGAGC CGCGTTAAGC AGATGGAAAA GCTGGAGGCG
CAAAAAGTGG AGCTCCCAGG CCAGGGACGC AGCGCCCCCG TTATCCGCTT GCCCGATCCC
CCGCCGTGTG CCAGTCAGGT GATGAAAATT GATAAAATGA GCATGGCCTA TGGCTCCACG
CAGGTGTTTA AAAACTGTCA ATTAGAGATC AGCAAAGGCT CGCGCATTGG GCTGCTTGGC
CCCAATGGTC GTGGTAAATC TACCCTGCTA AAATTGTTGT GTGGTGCGTT GCAACCAACC
GCGGGTGTGG TTATGCCAGG GGATCGGGTC AAGCCGGGCT TTTTTGCGCA GCATGCGCTG
GAGTCCCTGC GTCTTGGGGA TACCATCTTA GAGTCAGCCC GCGAGGTTGC CCCGCCCGGA
ACCACCGAGA CCCAACTGCG TACGGTGCTT GGGGGGCTCC TGTTTTCGGG TCAACGGGTC
GAAAAATTGG TCTCTGTGCT CTCCGGTGGT GAAAAGGCAC GGCTGGCCTT GGCGCGGCTA
TTTTTGAGTG GGGCCAATTT TTTATTGCTG GATGAACCCA CCAACCACTT GGATATGCCC
TCACGGGCCG CACTAGAAGA GGCTTTGGAG TCCTATCAGG GTACCTTTGT CTTGGTCTCC
CATGACCGCT CTCTGTTAGA GAGTGTTTGT GACCGCTATG TTGCCATCGC CCAGGATCAG
TTGCACCCCT TAGGAGAGGA TCTGGATCAT TACCTAGAGC ACTTTGTGCT GCAAGAGACA
GCCTCCCAGC CGAATGGAGT GCAAGACAAA ACCACAGCCC GCGCCCTTTC TAAGGAGAGC
AAACGCGAGG CGGCGCAGAT CCGTAATGCG CTGCATCAAC GCACCAAGCC CCTGCGCAGC
CAGCTTAACC AGTGCGAAAA AAACATCCAG CAGCTTGAAG CCGACAAAAC CCGCATTGAC
GCCACCCTCA CCGACAGCAG CCTCTATGAA GAGGGTCAAA AAGAGCGCTT AAAAAACCTG
TTGGAGAGCA GCACCCAAAC GGAACAAGCC CTGAGCAAAG CCTGGGCACT GTGGGAAACG
CTCAGCATGG AGATCGAGAC CCTGGAAGAG CAGGCCAAAC AAGCGCTGGA ACAGGCTTAA
 
Protein sequence
MLHLEKVEKR YGATIILSGT DLVIHPGEKV GLIGLNGMGK TTLFRIIEEV EPLDGGRLDR 
HPPHMRIGVL RQELTPAHRS ILQETLGGLP QLVALNNERE ALHSKMVEHP EHDAYHQWVM
RLGEVDHALE DLDAYSAEAR AGAILLGLGF STADLEKPLD AFSGGWRMRV ALAQLLFSAP
DLMLLDEPTN HLDLESVAWL ERYLAGLSGA YMLISHDRDF LQRTTRVTVE LEDGKLTRYK
GSFDAYMNWK IEQAELLSKQ AAKQADKLEA MQRFISRFRA KATKAKQVQS RVKQMEKLEA
QKVELPGQGR SAPVIRLPDP PPCASQVMKI DKMSMAYGST QVFKNCQLEI SKGSRIGLLG
PNGRGKSTLL KLLCGALQPT AGVVMPGDRV KPGFFAQHAL ESLRLGDTIL ESAREVAPPG
TTETQLRTVL GGLLFSGQRV EKLVSVLSGG EKARLALARL FLSGANFLLL DEPTNHLDMP
SRAALEEALE SYQGTFVLVS HDRSLLESVC DRYVAIAQDQ LHPLGEDLDH YLEHFVLQET
ASQPNGVQDK TTARALSKES KREAAQIRNA LHQRTKPLRS QLNQCEKNIQ QLEADKTRID
ATLTDSSLYE EGQKERLKNL LESSTQTEQA LSKAWALWET LSMEIETLEE QAKQALEQA