Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2094 |
Symbol | |
ID | 4480843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2567296 |
End bp | 2567610 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722838 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_866001 |
Protein GI | 117925384 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000638227 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.178484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCC AGCAAAGCAT AGATGCCGAA CGGGTCGTAC TGGTTCTGAG GGGGGATCTC AACCATTGCG CCCACCAAAC CTTTATGAGG GTAATCCACA GCCTCAGCCC TGACACCCGC TGTACCATCC ACTTAGATAT GGTAGCGTCC ATTGATAGCG CGGGTCTTGG TATGTTGCTG GTACTCTTTG AACAGTTGGG TAGCAAACCC AAAACGGTGC TCCTCTGCAA CCCCTGCCGG CAGGTGGCGG GTGCCCTAAG AAACAGTAAT TTCTATGCCC TGTTTGAGAT CCGGGATGAC TGCCCCATGC GTTAA
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Protein sequence | MEIQQSIDAE RVVLVLRGDL NHCAHQTFMR VIHSLSPDTR CTIHLDMVAS IDSAGLGMLL VLFEQLGSKP KTVLLCNPCR QVAGALRNSN FYALFEIRDD CPMR
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