Gene Mmc1_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2094 
Symbol 
ID4480843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2567296 
End bp2567610 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content53% 
IMG OID639722838 
Productanti-sigma-factor antagonist 
Protein accessionYP_866001 
Protein GI117925384 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000638227 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.178484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC AGCAAAGCAT AGATGCCGAA CGGGTCGTAC TGGTTCTGAG GGGGGATCTC 
AACCATTGCG CCCACCAAAC CTTTATGAGG GTAATCCACA GCCTCAGCCC TGACACCCGC
TGTACCATCC ACTTAGATAT GGTAGCGTCC ATTGATAGCG CGGGTCTTGG TATGTTGCTG
GTACTCTTTG AACAGTTGGG TAGCAAACCC AAAACGGTGC TCCTCTGCAA CCCCTGCCGG
CAGGTGGCGG GTGCCCTAAG AAACAGTAAT TTCTATGCCC TGTTTGAGAT CCGGGATGAC
TGCCCCATGC GTTAA
 
Protein sequence
MEIQQSIDAE RVVLVLRGDL NHCAHQTFMR VIHSLSPDTR CTIHLDMVAS IDSAGLGMLL 
VLFEQLGSKP KTVLLCNPCR QVAGALRNSN FYALFEIRDD CPMR