| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2089 |
|---|
| Symbol | |
|---|
| ID | 4480837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2561059 |
|---|
| End bp | 2561754 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639722832 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865996 |
|---|
| Protein GI | 117925379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0160515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.051607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGACTT TTTTCATGGA TCAGCAGACA TCAAAGCGTC CCATGGTGCT CCTCATTGAC
CTGGACAACT GTCCAAAGGA AATGGGGAAG GTTTCTCAGG TAGTTGATGA CTATACCAGG
ATCATCGTCT GCTATGGCGG TATTGAGCCC AAAGTTCCGC TGGGGCTGGT GACATCTTTA
GCTACAGCTA TTCACGATGG AAAGCTTGAA CTAATCGGTA TGGATCGTGG TGGAAAGAAT
GCTGCTGATT TTGGATTGGC TTTTTGGGCT GGTCGGTTGG TCACAGAGTT GCCTGAGGAA
ACGGCGTTTA CCATCCTTTC TGACGATACG GATCTAGACC ATGTCGTGGA CCTGCTCACT
CGCTCGGGCC GTCACGCGAA GCGCCTGAAT GGTCAACAGA GAAAACAGAA AGCTTATACG
AAAGCAGGGA CCGGCTCAGA CTCCACTGAT GTAGAGTTGG GCGGAGCTGT AAAACAGTAC
GTAGAGATGC GTCTTCTCCC TGGCAAACCA AGGCCAGCAA AGCGATCAAC TTTGCTCAAC
AGCATCAAAG CAGTGTTCTC ACCAAAGGAT GGGGTTTCGC CTGAAACCAT TTTGAAGCGA
CTTCAGGATG ACGGCTACCT TGAGATCAAC AGTAAAGGGA AAGTGGTCTA CTTGCTGGAT
AATTTTGGAG AGGAAGAAGA GGTCATTCAC TTCTGA
|
|---|
| Protein sequence | MWTFFMDQQT SKRPMVLLID LDNCPKEMGK VSQVVDDYTR IIVCYGGIEP KVPLGLVTSL
ATAIHDGKLE LIGMDRGGKN AADFGLAFWA GRLVTELPEE TAFTILSDDT DLDHVVDLLT
RSGRHAKRLN GQQRKQKAYT KAGTGSDSTD VELGGAVKQY VEMRLLPGKP RPAKRSTLLN
SIKAVFSPKD GVSPETILKR LQDDGYLEIN SKGKVVYLLD NFGEEEEVIH F
|
|---|
| |