| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2084 |
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| Symbol | |
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| ID | 4481470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2557353 |
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| End bp | 2558048 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722827 |
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| Product | SOS-response transcriptional repressor, LexA |
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| Protein accession | YP_865991 |
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| Protein GI | 117925374 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0507519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACA GAAAAGAGCA CAAAATGAAA CCAGGACGGA GACCCACAGA AGGGATGACG
CCGTCTCAAG AGCGCATCAT GCAGGTGATC CGGAATGCCA TTGATCGGGA TGGGTTACCC
CCGACAGTGA AAGAGATCGC CGAGGCGTTG GGCATGAAAA CGCCCAGTGC CCATGAACAG
GTGCAGAAAC TGGTAAAGAA GGGGTTTATA CGGCGCACAC CCCGTAAGGC GCGTTCCATT
GAAATTGTGG AACAGTCTCC TGAAGAAGAG CCTGTTGAGA AAAAGCCGGA TGTGGCCAGG
CTGGTCCCGG TACCTATCAT CGGTGAGGTG GCAGCAGGCA TCCCCATTCT GGCAGTGGAA
AACCATATTG GGGAGCTTCT GATGGACTCC CGTACAGCCA GGGGGCCCTG CTTTGCTCTT
AAGGTTAAAG GGGACAGTAT GATCGATGCC GAGATCTTCG AGGGGGATTA TGTGGTAGTG
CGCCATCAGG CCCTTGCGGA GAACGGAGAT ATTGTGGTGG CCATCCTGGA CGGAGAGGCC
ACAGTTAAAC GCTTGTACAT ATCAGAAGAG ACCATTGAGC TTCGACCGGA GAACCGGTCC
TACCAGCCCA TAGTCGTGCC CCCGGGTGGT GATATCCGAA TTTTGGGCAA GGTGCTGGCA
GTACGCGGCC ACGGGGCCGC CAACAATAAT GAATAA
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| Protein sequence | MTDRKEHKMK PGRRPTEGMT PSQERIMQVI RNAIDRDGLP PTVKEIAEAL GMKTPSAHEQ
VQKLVKKGFI RRTPRKARSI EIVEQSPEEE PVEKKPDVAR LVPVPIIGEV AAGIPILAVE
NHIGELLMDS RTARGPCFAL KVKGDSMIDA EIFEGDYVVV RHQALAENGD IVVAILDGEA
TVKRLYISEE TIELRPENRS YQPIVVPPGG DIRILGKVLA VRGHGAANNN E
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