Gene Mmc1_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2081 
Symbol 
ID4481467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2554718 
End bp2555116 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content53% 
IMG OID639722824 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_865988 
Protein GI117925371 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0527419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCC CCATTCCCTT CTTCACATCA TTGGTCCCGG CAGGTTTTCC ATCCCCGGCA 
GATGACTACC TTGAAGGCCA CTTGGATCTC AATGAACTGT TGATCAAGCG GCCTGCTGCC
ACATTCTTTG TACGGGTTAC TGGCGACTCC ATGATTGGAG CTGGGATTCA CTCCGGTGAC
ATCCTGGTGG TGGATCGATC ATTGGAGCCG ATCAATGGAT CCATCGTGAT CGCTGTGGTA
AGTGGCGAAC TGACGGTTAA ACGGCTCAAA AAGGACGGCG GGCGTGTTTG GCTTATGCCG
GAGAACAAAG ATTTTCAACC GATGGAGATC AGTGAAGAGC AGGAGATGAC CGTCTGGGGG
GTGGTGCGTA GTGCCATCCA CCAATTTGGT GTCGGTTGA
 
Protein sequence
MTLPIPFFTS LVPAGFPSPA DDYLEGHLDL NELLIKRPAA TFFVRVTGDS MIGAGIHSGD 
ILVVDRSLEP INGSIVIAVV SGELTVKRLK KDGGRVWLMP ENKDFQPMEI SEEQEMTVWG
VVRSAIHQFG VG