| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2077 |
|---|
| Symbol | |
|---|
| ID | 4481463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2551313 |
|---|
| End bp | 2552215 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639722820 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865984 |
|---|
| Protein GI | 117925367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.240996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.13514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGC CTCCCATCAT CACTGCAGAA GAGCGCATGG CGGAGCAACG GGGCATCAAG
GGGGTAATTC TGGGCCCCAG CGGCATCGGC AAGACATCGC TGCTGTGGTC CGTCGACCCT
AATTCCACCC TGTTCTTCGA CCTGGAGGCC GGCGACCTGG CCGTGGAGGG GTGGCCCGGG
GATACCATCC GCCCACGCAC CTGGGACGAG TGCCGCAACT TTGCAGTGTT CATTGGCGGC
CCCAACCCTG CGCTGAGGGA TGATCAGCAC TACAGTCAGG CTCACTACAA CGCTGTTTTA
CAGAAGTATG GCGACCCCGG GGTCATGGCC AAGTACCAGA GCATCTTTGT GGACAGCATA
ACCGTGGCCG GTCGGCTCTG CTTCCAATGG TGCAAGGGAC AGCCCCAGGC GTTCTCGGAG
AAAACCGGAA AACCAGATTT GCGGGGCGCT TACGGGCTGC ACGGCCAGGA GATGATCGCC
TGGATTACCC ACCTCCAGCA TACCCGGGGC AAGAACGTCT GGTTTGTCGG CATCCTTGAT
GAGAAGACCG ACGACTTCAA TCGGCGTTAC TACACCCCGC AGATTGAAGG ATCAAAAACC
GGTCTGGAAC TGCCCGGTAT TGTAGATCAG GTGATCAGCA TGGTGGAGGT CAAACCCGAG
GAGGGTCCGT CTTATCGAGC CTTCATCTGC CAGACACTCA ATCCATGGGG ATACCCGGCT
AAAGACAGAA GTGGTCGCCT CACCATGGTG GAGGAGCCCC ATCTGGGCCG CCTCATGGAG
AAAATACATC AACCCGGCAA ACCGGCAGCG GAAAGGCTTA GCTTCGAACG CCCTGAGAAA
GTGACCGAAG CCGCCCCCGC CACCGGCGCC CCCGTCGACA TGGCAATGAA CACAGGAGCA
TGA
|
|---|
| Protein sequence | MSGPPIITAE ERMAEQRGIK GVILGPSGIG KTSLLWSVDP NSTLFFDLEA GDLAVEGWPG
DTIRPRTWDE CRNFAVFIGG PNPALRDDQH YSQAHYNAVL QKYGDPGVMA KYQSIFVDSI
TVAGRLCFQW CKGQPQAFSE KTGKPDLRGA YGLHGQEMIA WITHLQHTRG KNVWFVGILD
EKTDDFNRRY YTPQIEGSKT GLELPGIVDQ VISMVEVKPE EGPSYRAFIC QTLNPWGYPA
KDRSGRLTMV EEPHLGRLME KIHQPGKPAA ERLSFERPEK VTEAAPATGA PVDMAMNTGA
|
|---|
| |