Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2065 |
Symbol | |
ID | 4481328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2541281 |
End bp | 2542012 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722808 |
Product | deoxyribonuclease I |
Protein accession | YP_865972 |
Protein GI | 117925355 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.014094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0314213 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAC CTGGATTTAT AGTTTTGACA CTCTCACTGC TGATGACCAT CTCGGCCATC GCCCAAGCTG CTGATCCTCA AATCCCCCAT CGCATTGCTT CGTTCAGCGA AGCTAAAAAG CTTCTCCCCA AAGTCTTTGA AGGCCACCGC ACTACATTTT ACTGCGGCTG TAGCTATACC AAGCATAAGG AAGTTCGGTC GGGAGCATGC GGCTATCAGC CCCGAAAAAA TCCTAAGCGG GGTAGTCGCA TTGAATGGGA ACACGTTGTT CCTGCTCACG CCTTTGGCCA TACCCGTCAG TGCTGGCAAG AGCCAATCTG TACAACCCAA AAAGGCAAAG CTTACAAAGG CCGCAGATGC TGTGCGAAGG TTGATCCCGT CTTTGAAGCG ATGGAGTCTG ATCTCCACAA CTTGGTCCCT GCAGTAGGTG AACTTAACGG CGATCGCAGC AACCTGTCAT TTTCTATGGT TTCAGGTGAG CCCAGAGCTT ATGGAGCCTG TGATTTTGAG ATCGACTGGG ACACCGACCG TGTTGAGCCC CGCCCTGAAG TGCGTGGTGA TATTGCTCGG ACCTATTTCT ACATGAATGC CACATACGGT TTGCCAATCA GCAAAAAGCA GAGGCGGCTC TTTGAAGTTT GGAACAGGGA AGATCCAGTC GATGACTGGG AACGTGAACG GAATCGTAGA ATAGAACGGA TGCAGGGTAA CGCAAATCCC TTTATCCAGT AG
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Protein sequence | MGKPGFIVLT LSLLMTISAI AQAADPQIPH RIASFSEAKK LLPKVFEGHR TTFYCGCSYT KHKEVRSGAC GYQPRKNPKR GSRIEWEHVV PAHAFGHTRQ CWQEPICTTQ KGKAYKGRRC CAKVDPVFEA MESDLHNLVP AVGELNGDRS NLSFSMVSGE PRAYGACDFE IDWDTDRVEP RPEVRGDIAR TYFYMNATYG LPISKKQRRL FEVWNREDPV DDWERERNRR IERMQGNANP FIQ
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