| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2034 |
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| Symbol | |
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| ID | 4481768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 2518566 |
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| End bp | 2522117 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639722777 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_865941 |
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| Protein GI | 117925324 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.5433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.337313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCGTA CCCAAGCTGC TTTGGAGTTC GTCATCCGTG CCAATGATGA TGAACTGCGT
TCTGCTGTCA CCCGTATGCA GAGCGACTTT CGTCAGGGCG TGCAATCCAT GGCCTCCGAT
GCTCAGACTC AGGCGCAGCG TATCAATGGG GCACTATCGG ACATCTATGC TTTCCGCAAT
CTAAAGCGAC AAATCAGGGA GAGTGAAGAT CAATGGCAGG CGGCCACCCG TGAGGTAGCC
CGTCTTGCGG TGCAGATGCG GGAGACCGAA ACACCCACCC GCGCCATGAC GCGCGCCTTT
GAGCAGGCCA AACGCAATGC CAAGAGCCTC AAGGATCAAG TAGATGCCCA GCGGGAGTCC
CTGCATGGTC TGCGGGGTGA TCTGCGTCAG GCTGGGGTGG ATACCGTCCG TCTTAGTGAA
AGCCAGGAAC GACTTCAACG GGATCTGAAT GCCTCCACCC GTGAAGTACA AGCCCAAAGC
CGAGTCAATC GCGCGTTTGC CACCATCGGC GTCCGATCCA TGCGGGAGGT AGAGGACGAA
GTCCAGAGGC TAGAGAATGC CTATCGGGAA CTGGCCCGAT CTGGGCGTGT ATCTGCGGCA
GATCTGAATC GAGCTCATCA GCAGATGCAG AGCCGGGTGC GTACCCTGCG TGGTGAAATG
CAGGGGTTGA ATGGTGCCAT GACCGGAATG GCGGGTACTG TGCGCAATCT GGCAGCAGCG
TATGCCGGGT TTGAATCCAT TCGTGCGGCC TCCAGCTTTA TCAAAGACTC CATCCTTACC
TATGCCGCCT TTGATGACAC CATGAGGCAG GTGGCGGCGA CGTCGGGCGC AACGGCAGGA
GAGCTCGCCC AACTGACCGA ACTGGCCAAG GATATGGGAT CTTCCACTCG CTTTTCTGCC
AGTCAAGCGG CCGGTGGTCT CAAGGCCATG TCTCTGGCTG GTTTGACGGC ATCTCAGCAA
CTGCAAGCCC TACCAAAAGT TTTGGAGCTG GCGGCAGCCG GTTCGGTGGA TCTGGAAACC
GTAGCGGGGA TCGCCACCGC CTCCATGGCT CAGTTTGGGC TACAGGCCCG TGATCTGGGC
AATGTAAACG ACATCTTGGT CACCGCCTTT ACCAACTCGG CAACCGATAT TCAGGATCTG
GGGCTGGCCC TGCAATACGC CGGTCCCGTG GCCCGTGCGG CTGGAAACAG CTTTGAAGAG
ACCGCCACCG TGCTGGCCCT GCTGGCCAAG AACGGCTTCT CTGGGGAAAA AGCAGGGACC
GCGTTGCGAG CCGCTTATGC CCGTCTATTG GCCCCTGTGG ATAAAGCCCA AGAGGCGATC
AACCGTTTGG GCTTGCAGAC CCGTGATGCC ACTGGTCTGC TTCTACCCAT GACCCAGGTA
CTGCGTAACC TCCGTGCAAG TGGTGCCGAT GCGGCTGACA TGATCCAGAT CTTTGGGGTG
GAAGCGGCTC CTGCGCTTAC TGCTGCGGTG GGTATGTCTT CCCAGGCGTT CGTGGAGCTG
GTCGCCAAGT TCAGCGAGGT CGGTGGTGTG GCTGCCCGGG TGGCCACCGA GATGGAAGCG
GGCATGGGCG GCTCGATCCG TTCCCTGGAG TCTGCCTGGG AGGGGGTGAA GATTGCCGTT
GGTGAGGCCA TCGACAAGCA CAGCAGCCTC AATTTTCAAG AGCTCACCTC CGCTATCAAT
GAAAACAAGG ATGCCATCGT CGAACTGGCC CTGGCCGGAG TGGATCTGGC CGTCATGCTG
GGGCGTGTGG CCCTGATGGT TGGCGAGTTC ATCCTGGAGT GGAAAGAGGT CATTGGTGTG
CTGGGTGGGG CGTATCTGGC CATCAAAACA CTGCGTGTGG CCATGGCAGC ACTCACAGCA
CTACAGACCG CTCAGTGGTT TCTAACTACC ACCCGTGCCG CGTCTGGCTT GGTAGCCGTG
GTAGGCGCTC AGGGACTGGT TGGCGCACTG GCGCTGGCCC GCACCCGTCT GCTCTCTCTT
ATCTCAATCA ATCTGGCCGG GTTCTTTATC CGGGGTGCCG CCGCTGTTGG AAGCCTGCTC
GCCGTGCTCA CAGGCCCTGT TGGGCTTATA GCTGGGGCGA CGGCGGCTGT GGGCGCACTA
GGCTACATGG CTTACTCCTG GTTGAAAACC AAAGATGCCC AGGATGAAGC AGCGGCTTCG
GGTCAGGCAG CCGTTGAAAC TCAGCAGCAG TTGGCTGCCC GTTTGAAGCA GATCGGGCAG
CAACTGGGGA TCAACATTCC CGACATTGAG ACCTTCAACC GTTTGCAACG GGAAGGCACC
ATCATTGCCG ACAAAAGCAC CGGGGGTTGG CGACTGGCCG CAAAGGCCGC TTCCGATGCC
ATTCAAACCC AGAGGCGCGC GGCCCAAGAA GCCGCCAACC AGCTTTCAAA TCTTACCCGT
CAGCGGACAT CTGCCCAGCG TAAACTGGCG GATCTTGAAC GACAACTGGC CGAAGAGCAG
AAGCGACAAG CCCGTGAGGT TCTCACCGAG AAGATCCGCA CCGCTGAACA GTCGGTCCAG
GCCACCGAAC GCGCCTTGCA ACAGAGCTTA GAAGCCGAGA AACGTTTGGC CAGCCAGATC
CAGGGGATCG AAGAGAAAAA GCGTAACGCC CGTATCTCCA CCGAGGATAA GGTGCGGTCG
CTCCTTGAAC GCAACATGTC TGATCGGGAG AAAGAGACCT CCCGTGCAGC GGCAGCCTCT
CAAAAGCTGG CAGAAGCCCA ACGCCTCCTC TCTCAGACCA CGCTTTCGGA GCGGGATATC
AAATGGGCCG AATCTTTGGC CCGTGGGGCC CAGGATGCTT TTTCCAGTTT GAATGATACC
TCCACCGCTA TTCGGGGCGT ACAGGACGCC GGGGATGTAC TGGATCAACT TTATCAACGC
CAGGAGGAGA GTGCGCGAAA GGCTCTGTCC AAGCAGAAAG ATCAGACCAC ATCCCTCACC
GAGCAGTTGG AAGTTGCCCG TGGGCGTGTT GCTCAGCTCA AAGAGGCGAT GGAGTCGCTG
CCAGACCGGG TGACCAAATC GGTAGAACTC CAGGCCCAGG TTGAGCAAGC CCAATCTGCA
CTCTCAGCCA TCGAAAAGCA GATGGCGGCA CTGAAGGATA AAACCGTCAC CGTCACGGTG
AAAACGATAG AGGCCAAGCA GTCAGGCGGC ATGATCGGCC TACAACGGGG TGGCCGTCTT
CCTGGCTATG GGGGTGGCGA TCGCATTCAT GCCTTGCTTG AAGCCGGTGA GATCGTGATC
CGCAAAGAGC GCTCCAGGAT CTTCAAGGAT TTGCTGCTGA CCATCAACTC CGCTCCCATG
GAGACCGTGA AGCGTATCCT GCCCAACCTG CCCAGGTTTC AAACCGGGGG GATGGTGGGG
TTGCCGGAGA TCCCCGCGCT TCCTCAGCTC TCCTTTGCAG GGGCCGGTGG TTCTGGACAG
CCCCCAGTAG AGGGGATCGT TCAGCTTGAT CTCACCATGA ACAGCAGACC GGCCGCTTCC
ATCACCAGTC CCCGGCAACA GGTGCGGCAA CTGGTAGATG CCCTCAAGGA ACTACAGCGC
GGTACCTTCT GA
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| Protein sequence | MARTQAALEF VIRANDDELR SAVTRMQSDF RQGVQSMASD AQTQAQRING ALSDIYAFRN
LKRQIRESED QWQAATREVA RLAVQMRETE TPTRAMTRAF EQAKRNAKSL KDQVDAQRES
LHGLRGDLRQ AGVDTVRLSE SQERLQRDLN ASTREVQAQS RVNRAFATIG VRSMREVEDE
VQRLENAYRE LARSGRVSAA DLNRAHQQMQ SRVRTLRGEM QGLNGAMTGM AGTVRNLAAA
YAGFESIRAA SSFIKDSILT YAAFDDTMRQ VAATSGATAG ELAQLTELAK DMGSSTRFSA
SQAAGGLKAM SLAGLTASQQ LQALPKVLEL AAAGSVDLET VAGIATASMA QFGLQARDLG
NVNDILVTAF TNSATDIQDL GLALQYAGPV ARAAGNSFEE TATVLALLAK NGFSGEKAGT
ALRAAYARLL APVDKAQEAI NRLGLQTRDA TGLLLPMTQV LRNLRASGAD AADMIQIFGV
EAAPALTAAV GMSSQAFVEL VAKFSEVGGV AARVATEMEA GMGGSIRSLE SAWEGVKIAV
GEAIDKHSSL NFQELTSAIN ENKDAIVELA LAGVDLAVML GRVALMVGEF ILEWKEVIGV
LGGAYLAIKT LRVAMAALTA LQTAQWFLTT TRAASGLVAV VGAQGLVGAL ALARTRLLSL
ISINLAGFFI RGAAAVGSLL AVLTGPVGLI AGATAAVGAL GYMAYSWLKT KDAQDEAAAS
GQAAVETQQQ LAARLKQIGQ QLGINIPDIE TFNRLQREGT IIADKSTGGW RLAAKAASDA
IQTQRRAAQE AANQLSNLTR QRTSAQRKLA DLERQLAEEQ KRQAREVLTE KIRTAEQSVQ
ATERALQQSL EAEKRLASQI QGIEEKKRNA RISTEDKVRS LLERNMSDRE KETSRAAAAS
QKLAEAQRLL SQTTLSERDI KWAESLARGA QDAFSSLNDT STAIRGVQDA GDVLDQLYQR
QEESARKALS KQKDQTTSLT EQLEVARGRV AQLKEAMESL PDRVTKSVEL QAQVEQAQSA
LSAIEKQMAA LKDKTVTVTV KTIEAKQSGG MIGLQRGGRL PGYGGGDRIH ALLEAGEIVI
RKERSRIFKD LLLTINSAPM ETVKRILPNL PRFQTGGMVG LPEIPALPQL SFAGAGGSGQ
PPVEGIVQLD LTMNSRPAAS ITSPRQQVRQ LVDALKELQR GTF
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