| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2025 |
|---|
| Symbol | |
|---|
| ID | 4480949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2511362 |
|---|
| End bp | 2512357 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639722768 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_865932 |
|---|
| Protein GI | 117925315 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.112072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACT TCACGCCCTC TTTAGACAAA GCAAAAATAC AGGAACACAG AAGGAACAAC
CTTCTGCAGA CGCTTCTACT GATCACCTCT ATGACAGGGC TGCTTGCTCT ACTCGGCTGG
ATACTGGCTG GAGAGGAAGG GGTTTGGTGG AGCTTGGCAC TGGCTATCGC GCTCAATCTG
TTGGTTCCAC AGGTTCCGCC AACATTCACG CTGAAGATGA TGGGCGCACG ACCGATCTCC
CATTATGCGC GTCCTGATCT CTACCAAATG GTTCAACAGT TGGGGAACAG AGCCGGTTTG
CCGACGACGC CCACCCTCTA TGCCATCCCC AGTAGCGTAC CCAACGCCAT GGCTGTTGGG
CCTGGTGAGC AGAGCGCTAT TGCGCTTTCT GATGGTTTGC TGCGTCTGCT TAACCAAAGA
GAACTCCTTG GCGTGATGGC CCATGAGGTC AGTCACATCA TGAATGGTGA TACTCGGGTA
TTGGCGTTGA CCGACGCCTT TCGACTATTG ACCACCACGT TATCCTCCAT AGGACAGATC
ATCATCTTGT TTGCCATTCC CTTATGGATA CTGGGTATTG TACAGATCTC CTGGCTGGCC
CTTCTGATTC TGCTGGCGGC CCCATTTGTG GGGATCGCGC TTCAACTGGC TCTCTCTCGC
ACACGTGAAT TTGAAGCGGA TCGAAGCGCT GTCGACTTGA CCAATGACCC TCATGGGCTG
GCCTCAGCAC TCAAGCGCAT TGAGATGCCC AGGTGGAACT GGATGTCACG TTTTCTCCGC
CCCATTCAGC ACCAGCGGGA GTACCACTGG TTAAAAACGC ACCCGGACAT CCAGGCCCGT
ATCGATAAAT TACTCTCCAT GTCAGGAGCA GATCAGGTCA TCCATTCACA TCCTGTGCAA
GTACTCTCTC GCCCAAGACA AGCGTATGTA CAACCGCGAT CTCGAGTGAT TCGCCCGGTG
ATTTATCGGC CAGCGATCCG ATGGGAGTGG AGGTAG
|
|---|
| Protein sequence | MRYFTPSLDK AKIQEHRRNN LLQTLLLITS MTGLLALLGW ILAGEEGVWW SLALAIALNL
LVPQVPPTFT LKMMGARPIS HYARPDLYQM VQQLGNRAGL PTTPTLYAIP SSVPNAMAVG
PGEQSAIALS DGLLRLLNQR ELLGVMAHEV SHIMNGDTRV LALTDAFRLL TTTLSSIGQI
IILFAIPLWI LGIVQISWLA LLILLAAPFV GIALQLALSR TREFEADRSA VDLTNDPHGL
ASALKRIEMP RWNWMSRFLR PIQHQREYHW LKTHPDIQAR IDKLLSMSGA DQVIHSHPVQ
VLSRPRQAYV QPRSRVIRPV IYRPAIRWEW R
|
|---|
| |