Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2024 |
Symbol | |
ID | 4480948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 2510734 |
End bp | 2511174 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639722767 |
Product | heat shock protein Hsp20 |
Protein accession | YP_865931 |
Protein GI | 117925314 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.106375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCTC TGATGGAATA CGATCCTTTC CGCAATGTTC GTACATTGCA AAACGAAATC AACCGGCTGT TTGACCACAA CTGGGAAGAG CCAAATGGAC AGATGGCCAA GTGGCCCATG CGGGTGGACA TCCGTGAGGA TGAAAACCAG ATCATGATCA AAGCCGATCT GCCCGGTATG ACGCAACAAG ACATCAGCGT CGATGTGGAC AACGGCACCC TGACTATCTC CGGTGAGCGC AAGTTTGACG ATGAACAAAA TCGTGATGGC TATCACCGGA TTGAACGGGC CTATGGCCGC TTCAGTCGCT CTTTTCAACT GCCCAATACC ACCGATACAG GGAACATCGC GGCAAAGTAT CAAAATGGTG TGTTGGAGGT GACGCTACCT AAGTTGGATG AGGCCAAGCC TCGTAGCATT CAGGTTGAAG TTCTCAACTA A
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Protein sequence | MAALMEYDPF RNVRTLQNEI NRLFDHNWEE PNGQMAKWPM RVDIREDENQ IMIKADLPGM TQQDISVDVD NGTLTISGER KFDDEQNRDG YHRIERAYGR FSRSFQLPNT TDTGNIAAKY QNGVLEVTLP KLDEAKPRSI QVEVLN
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