Gene Mmc1_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2024 
Symbol 
ID4480948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2510734 
End bp2511174 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content51% 
IMG OID639722767 
Productheat shock protein Hsp20 
Protein accessionYP_865931 
Protein GI117925314 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.106375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTC TGATGGAATA CGATCCTTTC CGCAATGTTC GTACATTGCA AAACGAAATC 
AACCGGCTGT TTGACCACAA CTGGGAAGAG CCAAATGGAC AGATGGCCAA GTGGCCCATG
CGGGTGGACA TCCGTGAGGA TGAAAACCAG ATCATGATCA AAGCCGATCT GCCCGGTATG
ACGCAACAAG ACATCAGCGT CGATGTGGAC AACGGCACCC TGACTATCTC CGGTGAGCGC
AAGTTTGACG ATGAACAAAA TCGTGATGGC TATCACCGGA TTGAACGGGC CTATGGCCGC
TTCAGTCGCT CTTTTCAACT GCCCAATACC ACCGATACAG GGAACATCGC GGCAAAGTAT
CAAAATGGTG TGTTGGAGGT GACGCTACCT AAGTTGGATG AGGCCAAGCC TCGTAGCATT
CAGGTTGAAG TTCTCAACTA A
 
Protein sequence
MAALMEYDPF RNVRTLQNEI NRLFDHNWEE PNGQMAKWPM RVDIREDENQ IMIKADLPGM 
TQQDISVDVD NGTLTISGER KFDDEQNRDG YHRIERAYGR FSRSFQLPNT TDTGNIAAKY
QNGVLEVTLP KLDEAKPRSI QVEVLN