Gene Mmc1_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_2019 
Symbol 
ID4480943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2508029 
End bp2508727 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content46% 
IMG OID639722762 
Producthypothetical protein 
Protein accessionYP_865926 
Protein GI117925309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.191226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTG ATGTCTATTG TGATGAAAGC CGCCCAGATC TGTTAACATC TCAACACCCA 
AAAGGAACGT ATGTCGCTAT TGGCAGCCTC TGGATTGAGA CCCTTCAGAG AAAAACTTGC
AAGGACGCCA TTCACTCGTT GCGAGACACC TATCGGGTAG GTGGTGAATT CAAATGGCAA
AAAGTTTCTC CGTCACGCGT GGAGTTCTAC AAAGCACTTA TTGACTGGTT TATGGGGCAA
GGCGCATCTG TGCGATTTCG ATGCATTCTG ATCCGCCATG ATCAGATTAA CTGGCAACTC
CATTCAGATG ACAGAGAGCT TGGATTTTAC AAGTTCTATT ATCAGTTACT CCATCATTGG
GTTCTTGACT TTAATAGATA TTCGGTATTT TGCGACTACA AAAGCAACAG GCTCATGGAC
CGCCCTGAAA CGCTTAGAAG GTGCTTATCA TCAGCCAATC TATCATCTGA CATCCTGCGC
GTTCAGCCAG TACGTTCTGA AGAATCAGTC TTGATCCAAG CAGCAGATGT TTTGACCGGA
GCAGTCAGCG CAAAATTCAA TAAAGGTTTG GCTGAAAATG GTGCAAAGTC ACAGCTTATC
GAACATCTGG AGAACCGGTT GGGCCACCCA TTGACCCCCA CCGTTCGCGG CGAGAAAAAG
TTCAATATAT TTGCAATCGA CCTTGGCGGG GGTTGGTAA
 
Protein sequence
MEFDVYCDES RPDLLTSQHP KGTYVAIGSL WIETLQRKTC KDAIHSLRDT YRVGGEFKWQ 
KVSPSRVEFY KALIDWFMGQ GASVRFRCIL IRHDQINWQL HSDDRELGFY KFYYQLLHHW
VLDFNRYSVF CDYKSNRLMD RPETLRRCLS SANLSSDILR VQPVRSEESV LIQAADVLTG
AVSAKFNKGL AENGAKSQLI EHLENRLGHP LTPTVRGEKK FNIFAIDLGG GW