Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_2019 |
Symbol | |
ID | 4480943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 2508029 |
End bp | 2508727 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639722762 |
Product | hypothetical protein |
Protein accession | YP_865926 |
Protein GI | 117925309 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.191226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTG ATGTCTATTG TGATGAAAGC CGCCCAGATC TGTTAACATC TCAACACCCA AAAGGAACGT ATGTCGCTAT TGGCAGCCTC TGGATTGAGA CCCTTCAGAG AAAAACTTGC AAGGACGCCA TTCACTCGTT GCGAGACACC TATCGGGTAG GTGGTGAATT CAAATGGCAA AAAGTTTCTC CGTCACGCGT GGAGTTCTAC AAAGCACTTA TTGACTGGTT TATGGGGCAA GGCGCATCTG TGCGATTTCG ATGCATTCTG ATCCGCCATG ATCAGATTAA CTGGCAACTC CATTCAGATG ACAGAGAGCT TGGATTTTAC AAGTTCTATT ATCAGTTACT CCATCATTGG GTTCTTGACT TTAATAGATA TTCGGTATTT TGCGACTACA AAAGCAACAG GCTCATGGAC CGCCCTGAAA CGCTTAGAAG GTGCTTATCA TCAGCCAATC TATCATCTGA CATCCTGCGC GTTCAGCCAG TACGTTCTGA AGAATCAGTC TTGATCCAAG CAGCAGATGT TTTGACCGGA GCAGTCAGCG CAAAATTCAA TAAAGGTTTG GCTGAAAATG GTGCAAAGTC ACAGCTTATC GAACATCTGG AGAACCGGTT GGGCCACCCA TTGACCCCCA CCGTTCGCGG CGAGAAAAAG TTCAATATAT TTGCAATCGA CCTTGGCGGG GGTTGGTAA
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Protein sequence | MEFDVYCDES RPDLLTSQHP KGTYVAIGSL WIETLQRKTC KDAIHSLRDT YRVGGEFKWQ KVSPSRVEFY KALIDWFMGQ GASVRFRCIL IRHDQINWQL HSDDRELGFY KFYYQLLHHW VLDFNRYSVF CDYKSNRLMD RPETLRRCLS SANLSSDILR VQPVRSEESV LIQAADVLTG AVSAKFNKGL AENGAKSQLI EHLENRLGHP LTPTVRGEKK FNIFAIDLGG GW
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