| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_2016 |
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| Symbol | |
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| ID | 4480940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2500120 |
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| End bp | 2502966 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639722759 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_865923 |
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| Protein GI | 117925306 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.302427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACCG CCCAGGAAGT GTTTCAACCA GGCAGCCTTG TCCGGGCCCG AGGTCGGGAG
TGGGTCGTCC TGCCGGAGAA CCGGGAACAG GTCCTCCGTT TACGACCGCT GGGAGGCAGT
GAAGAGGATG CCACCACCAT TTTTCTACCT TTGGAGCCAA CTCCCCCAGT GCCAGCCACC
TTTCAACTGC CTGATGCCAC CAAGGCGGGC TCGCAAACGG CGGCTCTGCT GCTGCGGGAC
TCTCTCCGCC TCAAGCTGCG CGCCGGTGCG GGACCATTTC GGAGTTTTGG CAATATCGGC
GTCGAACCTC GCGCCTATCA GTTGGTGCCG CTGCTCATGG CGCTACGCCT GGAGACGGTG
CGGCTGCTCA TCGCCGACGA TGTGGGGGTT GGCAAAACCA TTGAGGCTGG CCTGATCGTC
CGGGAGCTGT TGGATCGTGG CGAGGTGGAG AGGATGACGG TCATCTGCCC CCCGCACCTG
TGCGAACAGT GGCAAGAGGA GTTGGCAGCC AAATTCAACA TCCAGGCCGA GGTAGTGCGA
ACTGGGACAG CGGGACGCCT GGAGCGTGGC CTGATGGCCG GCCAGTCCAT CTTCGAGGAG
TACCCTTTCA CCATCGTTTC CCTGGACTAC ATCAAAGCCG ACCGTCGCCG GGACGAATTC
CTTCGAGCCT GCCCGGAGCT GGTCATCGTC GAAGAGGCCC ACAGCTCTGT CCGTAGTGGT
GGCAATACCC GGCACCAGCG CTACCAGCTT CTCAAAGGTC TGGCCGACGA TCCCAACCGG
CACATGCTGT TTCTCACCGC CACGCCCCAC AGCGGCGATG AGGAAGCTTT TTACAATCTG
CTCGGCCTGC TACGCCCCGA TTTCAAGCAG CTCCAGGGCG TCAACCCTGC CGACCGAAAG
GAATTGCGGG AGGATCTGGC CCGCTATTTC GTGCAACGGC GACGTCCGGA TATCCGGGAG
TGGCAAGACT CCACGGTGTT CCCGGATAGG GAATCGGCAG AGACCACCTA TGCCCTGACC
GGTGACTGGA AGCAACTGTT CGATGATGTC CTCCACTATG CCCGGGAGAT GGTGAAACAA
ACCGAAGGCT TGAGCCTCCT GAAACAGCGT ATGAGCTGGT GGGCGGCGCT GGCGCTGCTT
CGCTGTATCA GCAGTAGTCC GGCAGCGGCC GCCATGGCGC TTCGTACTCG CTTGGAATCC
ACCGAGGAGG AGTCGGAGGA GAGTCAGATC GCACTGTTGG AGAAGCAGGC GTCCGAAACG
GTTCTGGATG GCGACTCCGA AGAGACCCTC AATCAGGACG AAAGCGTTCC TGCCGGCACG
GTGGAAGATA CCGCCGCGCT CAAGAACCTG ATCAAGCGGG TGGACAAGCT CAAAGGTCCC
AAAAACGATC CCAAGCTGGA AGAGTTGATT TCCCAGTTGA AGGATCTCGT GTCCAACGGG
TTTCAACCTG TCGTCTTCTG CCGCTACATC GCCACCGCCC ATTATGTGGC GGAGCATCTG
CAGAGTGCGC TCAAACGCGC CGGGGTGGAG GTCATGGCCG TCACGGGGGA ACTGACCCCG
GAAGAGCGCG AGGAGAAGGT CCATGGCCTC TCCGAGTTTG CCAAGCGCCT GCTGGTGGCC
ACCGACTGCC TCAGTGAAGG CATCAACCTG CAAAACCTCT TCAACGCCGT GGTCCATTAC
GACCTGACCT GGAATCCCAC CCGCCACGAA CAGCGGGAAG GCCGGGTGGA TCGTTTCGGG
CAGCCTTCTC CCAAAGTCCG CGTGCTCATG TACTACGGTG AGAACAACCC GGTGGACGGG
GCGGTGTTGC AGGTGATCCT GCGCAAGGCG GAACGCATTC GCAAAGAGCT GGGCGTCACC
GTTCCCATGC CGTCGGACAG TAACAAGGTG ATGGACGCCA TTATGCAGAC GGTGCTGCTC
AAGGAAGGCA GCCTGGTCCA TGGCCAGCGC CAGTTCTCCC TGGTCTTCGA TGATCTGGAC
AACGAAGTGG ACATGGCCTG GGAGAGCGCC AAGGAGAAGG CCAAACAGAG CCAGACCATC
TTTGCCCAGC GCCGTCTGAA GCCGGAGGAT GTCCTGCCGG AGTGGGAGAA GGCCATTCAG
GTGCTGGGTG GGGAATCGGA CGTTGAGCGC TTTGTAACCC GCACGGCGGA ACGTCTCCGT
GCCCCATTGG AGCCGACGAA AAACCATTTT CGGTTCCCGT TGCAGCACAT GGCCCCGCAA
CTTCGGGAAC GTCTGGCCGG CGTGGGTCTG GAGGGCGCCA TTCGCATCAC CTTCACCCAT
CCCGCCCCTT CGGGGGTGGA ATATGTCCAC CGCGCCCACC CCCTGGTGGC CACCCTGGCG
GAGCATGTGG CGGAACGGGC GTTGGAGGAG GAAGAACCGG AACTGGCCGC CCGCTGTGGG
GCCATCTTCA CCAGGGAGGT CAAAACCCGC ACCACGGTCT TCCTGCTGCG CCTGCGTAGC
CAGTTGATGA TCGAGCGGCG CGAGGGCAAT CGCTTCGTCC CCCACCGGAC GCTGCTTTCC
GAGGAGTGCC TGGGCGTGGC GGTGGAGGGT TCCAGCGAAC CTCGGGTGTT GCCGGAAAAG
GATGCCCTGG CGTGGAAGAA GCTGGAGTCG GCCCGCAACA TGGAACCAGC GCAGAAAGCA
CAGATGATCG AGGCTGCCAA GGCCACTGTG GAAAAACTGC AACTGCCCTT CAGCCAGATC
GCCCGCAAAC GGGCCGATCA GCTATTGGCG GACCATCGCC GGGTCCGCGA GGCCAGCGAC
GCCAAGGGGG TTCGCTATGA CGTCAAAGCA TGTCTTCCTG TTGATGTCAT TGGCATCTAC
GTACTGGCGC CAGCTGTGAC GTTTTAA
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| Protein sequence | MSTAQEVFQP GSLVRARGRE WVVLPENREQ VLRLRPLGGS EEDATTIFLP LEPTPPVPAT
FQLPDATKAG SQTAALLLRD SLRLKLRAGA GPFRSFGNIG VEPRAYQLVP LLMALRLETV
RLLIADDVGV GKTIEAGLIV RELLDRGEVE RMTVICPPHL CEQWQEELAA KFNIQAEVVR
TGTAGRLERG LMAGQSIFEE YPFTIVSLDY IKADRRRDEF LRACPELVIV EEAHSSVRSG
GNTRHQRYQL LKGLADDPNR HMLFLTATPH SGDEEAFYNL LGLLRPDFKQ LQGVNPADRK
ELREDLARYF VQRRRPDIRE WQDSTVFPDR ESAETTYALT GDWKQLFDDV LHYAREMVKQ
TEGLSLLKQR MSWWAALALL RCISSSPAAA AMALRTRLES TEEESEESQI ALLEKQASET
VLDGDSEETL NQDESVPAGT VEDTAALKNL IKRVDKLKGP KNDPKLEELI SQLKDLVSNG
FQPVVFCRYI ATAHYVAEHL QSALKRAGVE VMAVTGELTP EEREEKVHGL SEFAKRLLVA
TDCLSEGINL QNLFNAVVHY DLTWNPTRHE QREGRVDRFG QPSPKVRVLM YYGENNPVDG
AVLQVILRKA ERIRKELGVT VPMPSDSNKV MDAIMQTVLL KEGSLVHGQR QFSLVFDDLD
NEVDMAWESA KEKAKQSQTI FAQRRLKPED VLPEWEKAIQ VLGGESDVER FVTRTAERLR
APLEPTKNHF RFPLQHMAPQ LRERLAGVGL EGAIRITFTH PAPSGVEYVH RAHPLVATLA
EHVAERALEE EEPELAARCG AIFTREVKTR TTVFLLRLRS QLMIERREGN RFVPHRTLLS
EECLGVAVEG SSEPRVLPEK DALAWKKLES ARNMEPAQKA QMIEAAKATV EKLQLPFSQI
ARKRADQLLA DHRRVREASD AKGVRYDVKA CLPVDVIGIY VLAPAVTF
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